STRINGSTRING
rsgA rsgA CHR53_18515 CHR53_18515 der der cmk cmk CHR53_19100 CHR53_19100 scpB scpB scpA scpA GCA_001636315_00795 GCA_001636315_00795 coaE coaE CHR53_21615 CHR53_21615 CHR53_21620 CHR53_21620 CHR53_21625 CHR53_21625 CHR53_27925 CHR53_27925 coaX coaX acpS acpS CHR53_03750 CHR53_03750 CHR53_04780 CHR53_04780 CHR53_06935 CHR53_06935 CHR53_08125 CHR53_08125 typA typA rsmD rsmD coaD coaD CHR53_09410 CHR53_09410 CHR53_09415 CHR53_09415 gmk gmk coaBC coaBC priA priA def-2 def-2 fmt fmt CHR53_09450 CHR53_09450 rlmN rlmN CHR53_09460 CHR53_09460 CHR53_09465 CHR53_09465 rsgA-2 rsgA-2 CHR53_09480 CHR53_09480 smc smc ribF ribF CHR53_09965 CHR53_09965 CHR53_11150 CHR53_11150 ribD ribD CHR53_11185 CHR53_11185 ribBA ribBA ribH ribH
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rsgAUnannotated protein; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. (352 aa)
CHR53_18515Unannotated protein. (1219 aa)
derUnannotated protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. (438 aa)
cmkUnannotated protein. (224 aa)
CHR53_19100Unannotated protein; Belongs to the pseudouridine synthase RsuA family. (245 aa)
scpBUnannotated protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. (206 aa)
scpAUnannotated protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. (256 aa)
GCA_001636315_00795Unannotated protein. (267 aa)
coaEUnannotated protein; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. (199 aa)
CHR53_21615Unannotated protein; Belongs to the pseudouridine synthase RsuA family. (239 aa)
CHR53_21620Unannotated protein. (543 aa)
CHR53_21625Unannotated protein. (421 aa)
CHR53_27925Unannotated protein; Belongs to the pseudouridine synthase RsuA family. (235 aa)
coaXUnannotated protein; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis. (259 aa)
acpSUnannotated protein; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family. (116 aa)
CHR53_03750Unannotated protein. (221 aa)
CHR53_04780Unannotated protein. (190 aa)
CHR53_06935Unannotated protein; Belongs to the flavin oxidoreductase frp family. (249 aa)
CHR53_08125Unannotated protein. (270 aa)
typAUnannotated protein. (612 aa)
rsmDUnannotated protein. (186 aa)
coaDUnannotated protein; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. (162 aa)
CHR53_09410Unannotated protein. (291 aa)
CHR53_09415Unannotated protein; Belongs to the RemA family. (87 aa)
gmkUnannotated protein; Essential for recycling GMP and indirectly, cGMP. (204 aa)
coaBCUnannotated protein; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. (408 aa)
priAUnannotated protein; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (803 aa)
def-2Unannotated protein; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. (161 aa)
fmtUnannotated protein; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. (315 aa)
CHR53_09450Unannotated protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. (449 aa)
rlmNUnannotated protein; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family. (363 aa)
CHR53_09460Unannotated protein. (250 aa)
CHR53_09465Unannotated protein. (637 aa)
rsgA-2Unannotated protein; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. (293 aa)
CHR53_09480Unannotated protein. (215 aa)
smcUnannotated protein; Required for chromosome condensation and partitioning. Belongs to the SMC family. (1188 aa)
ribFUnannotated protein; Belongs to the ribF family. (314 aa)
CHR53_09965Unannotated protein; Belongs to the ribF family. (298 aa)
CHR53_11150Unannotated protein. (250 aa)
ribDUnannotated protein; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. (360 aa)
CHR53_11185Unannotated protein. (219 aa)
ribBAUnannotated protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. (397 aa)
ribHUnannotated protein; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin; Belongs to the DMRL synthase family. (156 aa)
Your Current Organism:
Bacillus mesonae
NCBI taxonomy Id: 1193713
Other names: B. mesonae, Bacillus mesonae Liu et al. 2014, Bacillus sp. FJAT-13985, CGMCC1.12238, DSM 25968, strain FJAT-13985
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