STRINGSTRING
tpiA tpiA trpF trpF fucI fucI pgi pgi hisA hisA manA manA rpiB rpiB rpiA rpiA nagB nagB uxaC uxaC pgi-2 pgi-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
tpiAUnannotated protein; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (253 aa)
trpFUnannotated protein; Belongs to the TrpF family. (208 aa)
fucIUnannotated protein; Converts the aldose L-fucose into the corresponding ketose L- fuculose. (596 aa)
pgiUnannotated protein; Belongs to the GPI family. (449 aa)
hisAUnannotated protein. (243 aa)
manAUnannotated protein; Belongs to the mannose-6-phosphate isomerase type 1 family. (319 aa)
rpiBUnannotated protein. (148 aa)
rpiAUnannotated protein; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. (223 aa)
nagBUnannotated protein; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion. (240 aa)
uxaCUnannotated protein. (467 aa)
pgi-2Unannotated protein; Belongs to the GPI family. (446 aa)
Your Current Organism:
Bacillus mesonae
NCBI taxonomy Id: 1193713
Other names: B. mesonae, Bacillus mesonae Liu et al. 2014, Bacillus sp. FJAT-13985, CGMCC1.12238, DSM 25968, strain FJAT-13985
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