STRINGSTRING
xsc xsc CHR53_17285 CHR53_17285 menD menD ilvB ilvB CHR53_26135 CHR53_26135 CHR53_02145 CHR53_02145 CHR53_03875 CHR53_03875 ilvB-2 ilvB-2 CHR53_08635 CHR53_08635 CHR53_09925 CHR53_09925 CHR53_13590 CHR53_13590 CHR53_14260 CHR53_14260
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
xscUnannotated protein; Belongs to the TPP enzyme family. (589 aa)
CHR53_17285Unannotated protein. (222 aa)
menDUnannotated protein; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily. (583 aa)
ilvBUnannotated protein. (567 aa)
CHR53_26135Unannotated protein; Belongs to the TPP enzyme family. (544 aa)
CHR53_02145Unannotated protein; Belongs to the TPP enzyme family. (557 aa)
CHR53_03875Unannotated protein; Belongs to the TPP enzyme family. (547 aa)
ilvB-2Unannotated protein. (575 aa)
CHR53_08635Unannotated protein. (764 aa)
CHR53_09925Unannotated protein. (288 aa)
CHR53_13590Unannotated protein; Belongs to the TPP enzyme family. (528 aa)
CHR53_14260Unannotated protein; Belongs to the TPP enzyme family. (553 aa)
Your Current Organism:
Bacillus mesonae
NCBI taxonomy Id: 1193713
Other names: B. mesonae, Bacillus mesonae Liu et al. 2014, Bacillus sp. FJAT-13985, CGMCC1.12238, DSM 25968, strain FJAT-13985
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