STRINGSTRING
A361_18010 A361_18010 A361_18015 A361_18015 A361_18020 A361_18020 A361_18030 A361_18030 A361_18035 A361_18035 A361_18040 A361_18040 A361_18045 A361_18045 A361_18050 A361_18050 A361_18055 A361_18055 A361_18060 A361_18060 A361_18065 A361_18065
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A361_18010PAS domain S-box protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (575 aa)
A361_18015Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (150 aa)
A361_18020DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (217 aa)
A361_18030Nitrate/nitrite transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (502 aa)
A361_18035Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (91 aa)
A361_18040Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (103 aa)
A361_18045Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (63 aa)
A361_180502Fe-2S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (174 aa)
A361_18055Electron transfer flavoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology. (186 aa)
A361_18060Nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (722 aa)
A361_18065Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (360 aa)
Your Current Organism:
Bacillus oceanisediminis
NCBI taxonomy Id: 1196031
Other names: B. oceanisediminis 2691, Bacillus oceanisediminis 2691
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