STRINGSTRING
A361_04445 A361_04445 A361_04450 A361_04450 A361_04455 A361_04455 A361_04460 A361_04460 A361_04470 A361_04470 A361_04475 A361_04475 A361_04480 A361_04480 A361_04485 A361_04485 A361_04490 A361_04490 A361_14040 A361_14040 A361_14045 A361_14045 A361_14050 A361_14050 A361_14055 A361_14055
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A361_04445DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (224 aa)
A361_04450Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (331 aa)
A361_04455Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (651 aa)
A361_04460Bacitracin ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (248 aa)
A361_04470Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (155 aa)
A361_04475DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (229 aa)
A361_04480Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (333 aa)
A361_04485Bacitracin ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (254 aa)
A361_04490ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (620 aa)
A361_14040DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (231 aa)
A361_14045Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (334 aa)
A361_14050Bacitracin ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (253 aa)
A361_14055Bacitracin ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (646 aa)
Your Current Organism:
Bacillus oceanisediminis
NCBI taxonomy Id: 1196031
Other names: B. oceanisediminis 2691, Bacillus oceanisediminis 2691
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