STRINGSTRING
A361_04165 A361_04165 A361_04320 A361_04320 A361_04325 A361_04325 A361_04330 A361_04330 A361_04970 A361_04970 A361_04975 A361_04975 A361_04980 A361_04980 A361_04985 A361_04985 A361_06490 A361_06490 A361_06495 A361_06495 A361_14985 A361_14985 A361_14990 A361_14990 A361_15500 A361_15500 A361_16370 A361_16370 A361_26735 A361_26735 A361_26740 A361_26740
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A361_04165Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (171 aa)
A361_04320Spore gernimation protein GerC; Derived by automated computational analysis using gene prediction method: Protein Homology. (360 aa)
A361_04325Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (359 aa)
A361_04330Spore gernimation protein GerA; Derived by automated computational analysis using gene prediction method: Protein Homology. (444 aa)
A361_04970AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (287 aa)
A361_04975Choline transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BCCT transporter (TC 2.A.15) family. (504 aa)
A361_04980Damage-inducible protein DinB; Derived by automated computational analysis using gene prediction method: Protein Homology. (165 aa)
A361_04985GNAT family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (266 aa)
A361_06490Elongation factor G-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (212 aa)
A361_06495Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (87 aa)
A361_14985yibE/F-like family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (372 aa)
A361_14990YibE/F; Derived by automated computational analysis using gene prediction method: Protein Homology. (258 aa)
A361_15500Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology. (112 aa)
A361_16370Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (167 aa)
A361_26735XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (225 aa)
A361_267403-phosphoglycerate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (392 aa)
Your Current Organism:
Bacillus oceanisediminis
NCBI taxonomy Id: 1196031
Other names: B. oceanisediminis 2691, Bacillus oceanisediminis 2691
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