STRINGSTRING
A361_03555 A361_03555 A361_03560 A361_03560 A361_03565 A361_03565 A361_03570 A361_03570 A361_20655 A361_20655 A361_24560 A361_24560 A361_24565 A361_24565
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A361_03555Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology. (136 aa)
A361_03560Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. (231 aa)
A361_03565Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (185 aa)
A361_03570Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (159 aa)
A361_20655Damage-inducible protein DinB; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (253 aa)
A361_24560Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (177 aa)
A361_24565Metal-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (228 aa)
Your Current Organism:
Bacillus oceanisediminis
NCBI taxonomy Id: 1196031
Other names: B. oceanisediminis 2691, Bacillus oceanisediminis 2691
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