STRINGSTRING
A361_05040 A361_05040 A361_05130 A361_05130 A361_05175 A361_05175 A361_12020 A361_12020 A361_12715 A361_12715 A361_12720 A361_12720 A361_12725 A361_12725 A361_12730 A361_12730 A361_13995 A361_13995 A361_14815 A361_14815 A361_14820 A361_14820 A361_15385 A361_15385 A361_15390 A361_15390 A361_17425 A361_17425 A361_23115 A361_23115 A361_23180 A361_23180 A361_25895 A361_25895 A361_26535 A361_26535
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A361_05040Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (608 aa)
A361_05130Peptidase S8; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family. (423 aa)
A361_05175Peptidase S8; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family. (418 aa)
A361_12020Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1128 aa)
A361_12715DNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (85 aa)
A361_12720Derived by automated computational analysis using gene prediction method: Protein Homology. (269 aa)
A361_12725Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family. (321 aa)
A361_12730Mismatch-specific DNA-glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (170 aa)
A361_13995Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family. (1171 aa)
A361_14815Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (93 aa)
A361_14820Phospholipase; Derived by automated computational analysis using gene prediction method: Protein Homology. (97 aa)
A361_15385Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family. (1362 aa)
A361_15390Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (64 aa)
A361_17425Conjugal transfer protein TraB; Derived by automated computational analysis using gene prediction method: Protein Homology. (388 aa)
A361_23115Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (165 aa)
A361_23180Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (685 aa)
A361_25895Peptidase S8; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family. (755 aa)
A361_26535Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (161 aa)
Your Current Organism:
Bacillus oceanisediminis
NCBI taxonomy Id: 1196031
Other names: B. oceanisediminis 2691, Bacillus oceanisediminis 2691
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