STRINGSTRING
A361_03665 A361_03665 A361_03670 A361_03670 A361_03675 A361_03675 A361_04175 A361_04175 A361_04180 A361_04180 A361_04185 A361_04185 A361_04190 A361_04190 A361_04405 A361_04405 A361_04410 A361_04410 A361_08725 A361_08725 A361_08730 A361_08730 A361_10280 A361_10280 A361_10650 A361_10650 A361_10655 A361_10655 A361_11120 A361_11120 A361_11125 A361_11125 A361_11130 A361_11130 A361_14400 A361_14400 A361_14880 A361_14880 A361_14885 A361_14885 A361_14890 A361_14890 A361_16515 A361_16515 A361_16895 A361_16895 A361_16905 A361_16905 A361_16910 A361_16910 A361_16915 A361_16915 A361_16920 A361_16920 A361_17535 A361_17535 A361_17540 A361_17540 A361_24520 A361_24520 A361_24525 A361_24525 A361_26575 A361_26575 A361_26580 A361_26580
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A361_03665GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (462 aa)
A361_03670MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (438 aa)
A361_03675Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (401 aa)
A361_04175Isochorismatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (184 aa)
A361_04180Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (148 aa)
A361_04185Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (291 aa)
A361_04190Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (88 aa)
A361_04405AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (230 aa)
A361_04410Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (296 aa)
A361_08725MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily. (499 aa)
A361_08730LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (298 aa)
A361_10280Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (354 aa)
A361_10650Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (253 aa)
A361_10655Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (135 aa)
A361_11120GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (458 aa)
A361_11125GNAT family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (190 aa)
A361_11130Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (396 aa)
A361_14400Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (292 aa)
A361_14880Class D beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology. (278 aa)
A361_14885GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (448 aa)
A361_14890Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (166 aa)
A361_16515Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (282 aa)
A361_16895Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (147 aa)
A361_16905GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (463 aa)
A361_16910Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (309 aa)
A361_16915Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (347 aa)
A361_16920Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (295 aa)
A361_17535LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (299 aa)
A361_17540Methionine aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (69 aa)
A361_24520Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (304 aa)
A361_24525GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (474 aa)
A361_26575AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (290 aa)
A361_26580Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (149 aa)
Your Current Organism:
Bacillus oceanisediminis
NCBI taxonomy Id: 1196031
Other names: B. oceanisediminis 2691, Bacillus oceanisediminis 2691
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