STRINGSTRING
A361_13740 A361_13740 A361_11020 A361_11020 A361_17865 A361_17865 A361_08295 A361_08295 A361_04840 A361_04840 murB murB A361_17875 A361_17875
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A361_13740Lactate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (478 aa)
A361_110202-hydroxy-acid oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (463 aa)
A361_17865Glycolate oxidase subunit GlcD; Derived by automated computational analysis using gene prediction method: Protein Homology. (486 aa)
A361_08295Glycolate oxidase subunit GlcD; Derived by automated computational analysis using gene prediction method: Protein Homology. (470 aa)
A361_04840Glycolate oxidase subunit GlcD; Derived by automated computational analysis using gene prediction method: Protein Homology. (458 aa)
murBUDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation. (302 aa)
A361_17875Lactate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (440 aa)
Your Current Organism:
Bacillus oceanisediminis
NCBI taxonomy Id: 1196031
Other names: B. oceanisediminis 2691, Bacillus oceanisediminis 2691
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