STRINGSTRING
A361_15225 A361_15225 A361_14180 A361_14180 A361_13745 A361_13745 A361_12830 A361_12830 A361_12600 A361_12600 A361_11650 A361_11650 A361_11595 A361_11595 A361_08420 A361_08420 A361_07255 A361_07255 A361_04235 A361_04235 A361_03875 A361_03875 A361_03015 A361_03015 A361_02450 A361_02450 A361_02095 A361_02095 A361_02070 A361_02070 A361_04885 A361_04885 A361_27010 A361_27010 A361_25750 A361_25750 A361_25525 A361_25525 A361_25330 A361_25330 A361_25250 A361_25250 A361_25150 A361_25150 A361_24795 A361_24795 A361_24530 A361_24530 A361_24330 A361_24330 A361_23440 A361_23440 A361_22690 A361_22690 A361_22160 A361_22160 A361_20610 A361_20610 A361_20130 A361_20130 A361_19700 A361_19700 A361_18670 A361_18670 A361_18030 A361_18030 A361_18010 A361_18010 A361_15705 A361_15705 A361_15575 A361_15575
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A361_15225PAS domain S-box protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (463 aa)
A361_14180PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (419 aa)
A361_13745Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (631 aa)
A361_12830PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (718 aa)
A361_12600PAS domain S-box protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (343 aa)
A361_11650Sigma-54-dependent Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (455 aa)
A361_11595PAS domain S-box protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (294 aa)
A361_08420PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (614 aa)
A361_07255Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (973 aa)
A361_04235Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (520 aa)
A361_03875Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (540 aa)
A361_03015Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (461 aa)
A361_02450PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (543 aa)
A361_02095PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (552 aa)
A361_02070PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (487 aa)
A361_04885Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (533 aa)
A361_27010PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (607 aa)
A361_25750Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (527 aa)
A361_25525Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (309 aa)
A361_25330PAS domain S-box protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (462 aa)
A361_25250Sigma-54-dependent Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (594 aa)
A361_25150AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (673 aa)
A361_24795PAS domain S-box protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (861 aa)
A361_24530PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (471 aa)
A361_24330Sigma-54-dependent Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (537 aa)
A361_23440Sigma-54-dependent Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (474 aa)
A361_22690Sigma-54-dependent Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (453 aa)
A361_22160PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (591 aa)
A361_20610Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (445 aa)
A361_20130Sigma-54-dependent Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (688 aa)
A361_19700PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (594 aa)
A361_18670Sigma-54-dependent Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (480 aa)
A361_18030Nitrate/nitrite transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (502 aa)
A361_18010PAS domain S-box protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (575 aa)
A361_15705PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (512 aa)
A361_15575Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (329 aa)
Your Current Organism:
Bacillus oceanisediminis
NCBI taxonomy Id: 1196031
Other names: B. oceanisediminis 2691, Bacillus oceanisediminis 2691
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