STRINGSTRING
A361_24960 A361_24960 A361_11810 A361_11810 A361_12585 A361_12585 A361_15450 A361_15450 A361_19330 A361_19330 A361_20880 A361_20880 glgA glgA A361_23190 A361_23190 A361_23195 A361_23195 A361_23235 A361_23235 A361_23240 A361_23240 A361_23255 A361_23255 A361_23260 A361_23260 A361_24865 A361_24865 A361_24870 A361_24870 A361_24890 A361_24890
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A361_24960Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (369 aa)
A361_11810Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology. (367 aa)
A361_12585Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology. (361 aa)
A361_15450Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (420 aa)
A361_19330N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA; Derived by automated computational analysis using gene prediction method: Protein Homology. (381 aa)
A361_20880Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (411 aa)
glgAStarch synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose. (483 aa)
A361_23190Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (392 aa)
A361_23195Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (396 aa)
A361_23235UDP-glucose 4-epimerase; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (399 aa)
A361_23240Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology. (388 aa)
A361_23255Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology. (369 aa)
A361_23260Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (383 aa)
A361_24865Glycosyltransferase WbuB; Derived by automated computational analysis using gene prediction method: Protein Homology. (413 aa)
A361_24870Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (364 aa)
A361_24890Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (414 aa)
Your Current Organism:
Bacillus oceanisediminis
NCBI taxonomy Id: 1196031
Other names: B. oceanisediminis 2691, Bacillus oceanisediminis 2691
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