34 items (Streptomyces wuyuanensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SDL94021.1	Hypothetical protein. (177 aa)
	SDL94150.1	Hypothetical protein. (50 aa)
	SDL94164.1	Uncharacterized conserved protein, LabA/DUF88 family. (298 aa)
	SDL96235.1	Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding. (209 aa)
	SDL96262.1	Ubiquinone/menaquinone biosynthesis C-methylase UbiE. (254 aa)
	SDM01556.1	Lamin Tail Domain. (209 aa)
	SDM11402.1	Hypothetical protein. (65 aa)
	SDM11417.1	TROVE domain-containing protein. (527 aa)
	SDM22031.1	Hypothetical protein. (67 aa)
	SDM38660.1	Probable phosphoglycerate mutase. (206 aa)
	SDM38682.1	Hypothetical protein. (393 aa)
	SDM38697.1	Hypothetical protein. (529 aa)
	SDM38720.1	Part of AAA domain-containing protein. (448 aa)
	SDM38746.1	Hypothetical protein. (119 aa)
	SDM38759.1	Bifunctional DNA primase/polymerase, N-terminal. (222 aa)
	SDM59061.1	Hypothetical protein. (185 aa)
	SDM59079.1	ABC-2 type transport system permease protein. (239 aa)
	SDM59099.1	ABC-2 type transport system ATP-binding protein. (303 aa)
	SDM59125.1	ABC-2 type transport system permease protein. (303 aa)
	SDM59142.1	ABC-2 type transport system ATP-binding protein. (321 aa)
	SDM59165.1	Metallopeptidase family M24. (282 aa)
	SDM59192.1	NADP-dependent 3-hydroxy acid dehydrogenase YdfG. (594 aa)
	SDM59210.1	MerR HTH family regulatory protein. (313 aa)
	kptA	Putative RNA 2'-phosphotransferase; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase. (180 aa)
	SDM59254.1	Luciferase-like monooxygenase. (315 aa)
	SDM59278.1	Hypothetical protein. (288 aa)
	SDM90293.1	Endonuclease, Uma2 family (restriction endonuclease fold). (192 aa)
	SDN14709.1	Lamin Tail Domain. (225 aa)
	SDN14721.1	Gamma-glutamyl:cysteine ligase YbdK, ATP-grasp superfamily. (492 aa)
	SDN14741.1	Sortase A. (267 aa)
	SDN32986.1	Hypothetical protein. (301 aa)
	SDN44656.1	SAM-dependent methyltransferase, MidA family. (330 aa)
	SDN49387.1	Predicted arabinose efflux permease, MFS family. (487 aa)
	SDN57238.1	Protein of unknown function. (262 aa)

Your Current Organism:

Streptomyces wuyuanensis

NCBI taxonomy Id: 1196353
Other names: CGMCC 4.7042, KCTC 29112, S. wuyuanensis, Streptomyces sp. FX61, Streptomyces wuyuanensis Zhang et al. 2013, strain FX61

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SDL94021.1	SDL96235.1	SAMN05444921_102307	SAMN05444921_102414	Hypothetical protein.	Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding.	0.574
SDL94021.1	SDM22031.1	SAMN05444921_102307	SAMN05444921_105192	Hypothetical protein.	Hypothetical protein.	0.769
SDL94021.1	SDM38682.1	SAMN05444921_102307	SAMN05444921_107215	Hypothetical protein.	Hypothetical protein.	0.426
SDL94021.1	SDM38697.1	SAMN05444921_102307	SAMN05444921_107216	Hypothetical protein.	Hypothetical protein.	0.416
SDL94021.1	SDM59079.1	SAMN05444921_102307	SAMN05444921_110147	Hypothetical protein.	ABC-2 type transport system permease protein.	0.635
SDL94021.1	SDM59099.1	SAMN05444921_102307	SAMN05444921_110148	Hypothetical protein.	ABC-2 type transport system ATP-binding protein.	0.486
SDL94021.1	SDM59125.1	SAMN05444921_102307	SAMN05444921_110149	Hypothetical protein.	ABC-2 type transport system permease protein.	0.576
SDL94021.1	SDM59142.1	SAMN05444921_102307	SAMN05444921_110150	Hypothetical protein.	ABC-2 type transport system ATP-binding protein.	0.446
SDL94021.1	SDM90293.1	SAMN05444921_102307	SAMN05444921_1153	Hypothetical protein.	Endonuclease, Uma2 family (restriction endonuclease fold).	0.520
SDL94021.1	SDN44656.1	SAMN05444921_102307	SAMN05444921_12748	Hypothetical protein.	SAM-dependent methyltransferase, MidA family.	0.771
SDL94150.1	SDL94164.1	SAMN05444921_102313	SAMN05444921_102314	Hypothetical protein.	Uncharacterized conserved protein, LabA/DUF88 family.	0.779
SDL94164.1	SDL94150.1	SAMN05444921_102314	SAMN05444921_102313	Uncharacterized conserved protein, LabA/DUF88 family.	Hypothetical protein.	0.779
SDL94164.1	SDM01556.1	SAMN05444921_102314	SAMN05444921_10327	Uncharacterized conserved protein, LabA/DUF88 family.	Lamin Tail Domain.	0.586
SDL94164.1	SDN14709.1	SAMN05444921_102314	SAMN05444921_12061	Uncharacterized conserved protein, LabA/DUF88 family.	Lamin Tail Domain.	0.447
SDL94164.1	SDN57238.1	SAMN05444921_102314	SAMN05444921_13020	Uncharacterized conserved protein, LabA/DUF88 family.	Protein of unknown function.	0.531
SDL96235.1	SDL94021.1	SAMN05444921_102414	SAMN05444921_102307	Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding.	Hypothetical protein.	0.574
SDL96235.1	SDL96262.1	SAMN05444921_102414	SAMN05444921_102415	Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding.	Ubiquinone/menaquinone biosynthesis C-methylase UbiE.	0.823
SDL96235.1	SDM22031.1	SAMN05444921_102414	SAMN05444921_105192	Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding.	Hypothetical protein.	0.493
SDL96262.1	SDL96235.1	SAMN05444921_102415	SAMN05444921_102414	Ubiquinone/menaquinone biosynthesis C-methylase UbiE.	Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding.	0.823
SDM01556.1	SDL94164.1	SAMN05444921_10327	SAMN05444921_102314	Lamin Tail Domain.	Uncharacterized conserved protein, LabA/DUF88 family.	0.586