STRINGSTRING
SDM12438.1 SDM12438.1 SDM12706.1 SDM12706.1 SDM13699.1 SDM13699.1 SDM13722.1 SDM13722.1 SDM13734.1 SDM13734.1 SDM13754.1 SDM13754.1 SDM14214.1 SDM14214.1 SDM14707.1 SDM14707.1 SDM15157.1 SDM15157.1 SDM15321.1 SDM15321.1 SDM10753.1 SDM10753.1 SDN01720.1 SDN01720.1 priA-2 priA-2 SDN06128.1 SDN06128.1 SDN06696.1 SDN06696.1 SDN07171.1 SDN07171.1 rpmE2 rpmE2 SDN12269.1 SDN12269.1 SDN11634.1 SDN11634.1 SDN14809.1 SDN14809.1 SDN19463.1 SDN19463.1 SDN19941.1 SDN19941.1 SDN20228.1 SDN20228.1 SDN21043.1 SDN21043.1 SDN18168.1 SDN18168.1 SDN18561.1 SDN18561.1 SDN18576.1 SDN18576.1 SDN18601.1 SDN18601.1 SDN24822.1 SDN24822.1 SDN24885.1 SDN24885.1 SDN24910.1 SDN24910.1 SDN24947.1 SDN24947.1 SDN25185.1 SDN25185.1 SDN22652.1 SDN22652.1 SDN23924.1 SDN23924.1 SDN28824.1 SDN28824.1 SDN26619.1 SDN26619.1 SDN27679.1 SDN27679.1 SDN32570.1 SDN32570.1 SDN36100.1 SDN36100.1 SDN36669.1 SDN36669.1 SDN40219.1 SDN40219.1 SDN44426.1 SDN44426.1 SDN44730.1 SDN44730.1 rpsR-2 rpsR-2 rpmE2-2 rpmE2-2 rpmG-3 rpmG-3 rpmB-2 rpmB-2 rpsN rpsN SDN48544.1 SDN48544.1 SDN48871.1 SDN48871.1 dtd dtd SDN50282.1 SDN50282.1 SDN50308.1 SDN50308.1 SDN52850.1 SDN52850.1 SDN54191.1 SDN54191.1 SDN54580.1 SDN54580.1 SDN57515.1 SDN57515.1 SDN57884.1 SDN57884.1 nuoN-2 nuoN-2 SDN62586.1 SDN62586.1 SDN64827.1 SDN64827.1 SDN65092.1 SDN65092.1 SDN65365.1 SDN65365.1 SDN65563.1 SDN65563.1 SDN65637.1 SDN65637.1 SDN66464.1 SDN66464.1 SDN68095.1 SDN68095.1 SDN69865.1 SDN69865.1 SDN69607.1 SDN69607.1 SDN69733.1 SDN69733.1 SDN73566.1 SDN73566.1 SDN73171.1 SDN73171.1 SDN75650.1 SDN75650.1 rpsO rpsO SDN77831.1 SDN77831.1 rpmE rpmE hpf hpf SDN80650.1 SDN80650.1 SDN81497.1 SDN81497.1 pdxS pdxS SDN81520.1 SDN81520.1 SDN03236.1 SDN03236.1 SDN03107.1 SDN03107.1 SDM97229.1 SDM97229.1 SDM96266.1 SDM96266.1 SDM90638.1 SDM90638.1 SDM93755.1 SDM93755.1 rpmI rpmI rplT rplT SDM84327.1 SDM84327.1 SDM85941.1 SDM85941.1 SDM78559.1 SDM78559.1 SDM78475.1 SDM78475.1 SDM78059.1 SDM78059.1 SDM77903.1 SDM77903.1 rpsT rpsT recO recO SDM76447.1 SDM76447.1 dnaG dnaG SDM79654.1 SDM79654.1 SDM70431.1 SDM70431.1 SDM69807.1 SDM69807.1 SDM73655.1 SDM73655.1 nuoN nuoN SDM73338.1 SDM73338.1 rpmG-2 rpmG-2 rplJ rplJ rplL rplL rpsG rpsG rpsJ rpsJ rplC rplC rplW rplW rplB rplB rpsS rpsS rpsC rpsC rpmC rpmC rpsQ rpsQ rplN rplN rplX rplX rplE rplE rpsZ rpsZ rpsH rpsH rplR rplR rpsE rpsE rpmD rpmD rplO rplO SDM69503.1 SDM69503.1 rpmJ-2 rpmJ-2 rpsK rpsK rplQ rplQ rplM rplM rpsI rpsI SDM64047.1 SDM64047.1 SDM66117.1 SDM66117.1 SDM66086.1 SDM66086.1 rplY rplY SDM65155.1 SDM65155.1 SDM64901.1 SDM64901.1 SDM57662.1 SDM57662.1 gyrB gyrB recF recF rpmH rpmH SDM60387.1 SDM60387.1 SDM60364.1 SDM60364.1 rpsF rpsF rpsR rpsR SDM59904.1 SDM59904.1 SDM50358.1 SDM50358.1 SDM52974.1 SDM52974.1 SDM52956.1 SDM52956.1 SDM52878.1 SDM52878.1 rpmJ rpmJ rpmG rpmG gvpA-2 gvpA-2 SDM51711.1 SDM51711.1 SDM51667.1 SDM51667.1 SDM51655.1 SDM51655.1 SDM51633.1 SDM51633.1 SDM51611.1 SDM51611.1 gvpA gvpA SDM51538.1 SDM51538.1 SDM51463.1 SDM51463.1 SDM51442.1 SDM51442.1 SDM51430.1 SDM51430.1 SDM51410.1 SDM51410.1 SDM42722.1 SDM42722.1 SDM42123.1 SDM42123.1 SDM46647.1 SDM46647.1 SDM45508.1 SDM45508.1 SDM45124.1 SDM45124.1 SDM44371.1 SDM44371.1 SDM44010.1 SDM44010.1 rplU rplU obg obg SDM28817.1 SDM28817.1 SDM28505.1 SDM28505.1 SDM27719.1 SDM27719.1 topA topA SDM32106.1 SDM32106.1 SDM32091.1 SDM32091.1 SDM32077.1 SDM32077.1 nth nth SDM31670.1 SDM31670.1 recR recR SDM31324.1 SDM31324.1 kynU kynU SDM30282.1 SDM30282.1 SDM19215.1 SDM19215.1 SDM23487.1 SDM23487.1 SDM18957.1 SDM18957.1 SDM18936.1 SDM18936.1 rpsB rpsB SDM18929.1 SDM18929.1 rpsP rpsP smc smc rpmF-2 rpmF-2 rpmB rpmB SDM18540.1 SDM18540.1 SDM22007.1 SDM22007.1 SDM20955.1 SDM20955.1 SDM10860.1 SDM10860.1 SDL74429.1 SDL74429.1 SDL75100.1 SDL75100.1 SDL76462.1 SDL76462.1 SDL77014.1 SDL77014.1 SDL79206.1 SDL79206.1 SDL79858.1 SDL79858.1 rpmF rpmF SDL80432.1 SDL80432.1 SDL73025.1 SDL73025.1 SDL73171.1 SDL73171.1 SDL73182.1 SDL73182.1 SDL73283.1 SDL73283.1 SDL73459.1 SDL73459.1 SDL91737.1 SDL91737.1 SDL88476.1 SDL88476.1 SDL94208.1 SDL94208.1 SDL94840.1 SDL94840.1 SDL94859.1 SDL94859.1 SDL95310.1 SDL95310.1 SDL95925.1 SDL95925.1 SDL96669.1 SDL96669.1 SDL97552.1 SDL97552.1 SDL89178.1 SDL89178.1 SDL89684.1 SDL89684.1 SDM04878.1 SDM04878.1 SDM02063.1 SDM02063.1 SDM02653.1 SDM02653.1 SDM12147.1 SDM12147.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SDM12438.1Hypothetical protein. (222 aa)
SDM12706.1SSU ribosomal protein S1P. (497 aa)
SDM13699.1ADP-ribosylglycohydrolase. (331 aa)
SDM13722.1ADP-ribosylglycohydrolase. (824 aa)
SDM13734.1ADP-ribosylglycohydrolase. (388 aa)
SDM13754.1ADP-ribosylglycohydrolase. (477 aa)
SDM14214.1Hypothetical protein. (249 aa)
SDM14707.1RNA polymerase-binding transcription factor DksA. (411 aa)
SDM15157.1Phytoene desaturase. (503 aa)
SDM15321.1Serine/threonine protein kinase. (641 aa)
SDM10753.1Transcriptional regulator. (73 aa)
SDN01720.1Hypothetical protein. (208 aa)
priA-2Replication restart DNA helicase PriA; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (722 aa)
SDN06128.1iron(III) transport system substrate-binding protein. (338 aa)
SDN06696.1Protein of unknown function. (249 aa)
SDN07171.1Saccharopine dehydrogenase NADP binding domain-containing protein. (348 aa)
rpmE2Large subunit ribosomal protein L31. (89 aa)
SDN12269.1Restriction system protein. (239 aa)
SDN11634.1Tetratricopeptide repeat-containing protein. (210 aa)
SDN14809.1MoxR-like ATPase. (315 aa)
SDN19463.1Phytoene dehydrogenase-related protein. (497 aa)
SDN19941.1Prenyltransferase and squalene oxidase repeat-containing protein. (419 aa)
SDN20228.1NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (239 aa)
SDN21043.1Hypothetical protein. (275 aa)
SDN18168.1DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family. (704 aa)
SDN18561.1Replicative DNA helicase. (451 aa)
SDN18576.1DNA replication protein DnaC. (207 aa)
SDN18601.1Hypothetical protein. (295 aa)
SDN24822.1ADP-ribosylglycohydrolase. (358 aa)
SDN24885.1AAA domain (dynein-related subfamily). (328 aa)
SDN24910.1Tetratricopeptide repeat-containing protein. (1325 aa)
SDN24947.1NAD-dependent deacetylase. (238 aa)
SDN25185.1Phytoene dehydrogenase-related protein. (473 aa)
SDN22652.1CHAT domain-containing protein. (675 aa)
SDN23924.1Protein of unknown function. (659 aa)
SDN28824.1Methyltransferase domain-containing protein. (254 aa)
SDN26619.1Predicted metal-dependent peptidase. (856 aa)
SDN27679.1Regulatory protein, luxR family. (887 aa)
SDN32570.1Carnitine O-acetyltransferase. (280 aa)
SDN36100.1Alpha-glucoside transport system substrate-binding protein. (458 aa)
SDN36669.1DNA-binding protein HU-beta; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. (93 aa)
SDN40219.1IstB-like ATP binding protein. (213 aa)
SDN44426.1Hypothetical protein. (205 aa)
SDN44730.1Osmoprotectant transport system permease protein. (222 aa)
rpsR-2Small subunit ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. (80 aa)
rpmE2-2Large subunit ribosomal protein L31. (84 aa)
rpmG-3LSU ribosomal protein L33P; Belongs to the bacterial ribosomal protein bL33 family. (64 aa)
rpmB-2Large subunit ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. (80 aa)
rpsNSmall subunit ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. (101 aa)
SDN48544.1Multiple sugar transport system substrate-binding protein. (425 aa)
SDN48871.1Phytoene dehydrogenase-related protein. (393 aa)
dtdD-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. (141 aa)
SDN50282.1Hypothetical protein. (357 aa)
SDN50308.1Hypothetical protein. (261 aa)
SDN52850.1Hypothetical protein. (74 aa)
SDN54191.1Small subunit ribosomal protein S1. (338 aa)
SDN54580.1Hypothetical protein. (66 aa)
SDN57515.1NADP-dependent 3-hydroxy acid dehydrogenase YdfG. (255 aa)
SDN57884.1Cytochrome c-type biogenesis protein CcsB. (359 aa)
nuoN-2NADH-quinone oxidoreductase subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family. (549 aa)
SDN62586.1Small subunit ribosomal protein S1. (189 aa)
SDN64827.1DNA repair protein RecN (Recombination protein N); May be involved in recombinational repair of damaged DNA. (572 aa)
SDN65092.1Chromosome partitioning protein. (387 aa)
SDN65365.1ADP-ribosylglycohydrolase. (346 aa)
SDN65563.1Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase. (173 aa)
SDN65637.1Chorismate mutase. (120 aa)
SDN66464.1Tetratricopeptide repeat-containing protein. (672 aa)
SDN68095.1AAA domain (dynein-related subfamily). (353 aa)
SDN69865.1Regulatory protein, luxR family. (989 aa)
SDN69607.1DNA replication protein DnaC. (256 aa)
SDN69733.1DNA replication protein DnaC. (268 aa)
SDN73566.1Restriction endonuclease. (488 aa)
SDN73171.1Restriction system protein. (192 aa)
SDN75650.1Uncharacterized protein, linocin/CFP29 family. (272 aa)
rpsOSSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. (95 aa)
SDN77831.1Nuclease-related domain-containing protein. (282 aa)
rpmELarge subunit ribosomal protein L31; Binds the 23S rRNA. (74 aa)
hpfRibosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. (229 aa)
SDN80650.1Osmoprotectant transport system permease protein. (272 aa)
SDN81497.1Putative DNA primase/helicase. (469 aa)
pdxSPyridoxal phosphate synthase yaaD subunit; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family. (304 aa)
SDN81520.1Bifunctional DNA primase/polymerase, N-terminal. (291 aa)
SDN03236.1Protein of unknown function. (409 aa)
SDN03107.1Recombination protein MgsA. (454 aa)
SDM97229.1Uncharacterized conserved protein. (396 aa)
SDM96266.1Squalene-hopene/tetraprenyl-beta-curcumene cyclase. (676 aa)
SDM90638.1Copper homeostasis protein; Belongs to the CutC family. (229 aa)
SDM93755.1ADP-ribosylglycohydrolase. (371 aa)
rpmILSU ribosomal protein L35P; Belongs to the bacterial ribosomal protein bL35 family. (64 aa)
rplTLSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (128 aa)
SDM84327.1FMN-binding domain-containing protein. (296 aa)
SDM85941.1ATP-dependent RNA helicase HelY. (942 aa)
SDM78559.1Alpha/beta hydrolase. (356 aa)
SDM78475.1Alpha/beta hydrolase. (403 aa)
SDM78059.1PELOTA RNA binding domain-containing protein. (843 aa)
SDM77903.1Hypothetical protein. (438 aa)
rpsTSmall subunit ribosomal protein S20; Binds directly to 16S ribosomal RNA. (88 aa)
recODNA replication and repair protein RecO; Involved in DNA repair and RecF pathway recombination. (253 aa)
SDM76447.1ERF superfamily protein. (260 aa)
dnaGDNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (635 aa)
SDM79654.1Alpha-glucosidase. (145 aa)
SDM70431.1Ribulose-5-phosphate 4-epimerase/Fuculose-1-phosphate aldolase. (264 aa)
SDM69807.1TniB protein. (361 aa)
SDM73655.1NADH-quinone oxidoreductase subunit M. (525 aa)
nuoNNADH-quinone oxidoreductase subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family. (512 aa)
SDM73338.1Transglycosylase SLT domain-containing protein. (152 aa)
rpmG-2Large subunit ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family. (54 aa)
rplJLSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. (176 aa)
rplLLSU ribosomal protein L12P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. (127 aa)
rpsGSSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. (156 aa)
rpsJSSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. (102 aa)
rplCLSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. (214 aa)
rplWLarge subunit ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. (104 aa)
rplBLSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. (278 aa)
rpsSSSU ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (93 aa)
rpsCSSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. (278 aa)
rpmCLSU ribosomal protein L29P; Belongs to the universal ribosomal protein uL29 family. (74 aa)
rpsQSSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. (94 aa)
rplNLSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. (122 aa)
rplXLSU ribosomal protein L24P; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. (107 aa)
rplELSU ribosomal protein L5P; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. (185 aa)
rpsZSSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. (61 aa)
rpsHSSU ribosomal protein S8P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. (132 aa)
rplRLarge subunit ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. (127 aa)
rpsESSU ribosomal protein S5P; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. (203 aa)
rpmDLSU ribosomal protein L30P. (60 aa)
rplOLSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. (151 aa)
SDM69503.1Hypothetical protein. (317 aa)
rpmJ-2Large subunit ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family. (47 aa)
rpsKSSU ribosomal protein S11P; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. (134 aa)
rplQLarge subunit ribosomal protein L17. (164 aa)
rplMLSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. (147 aa)
rpsISmall subunit ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. (172 aa)
SDM64047.1Hypothetical protein. (440 aa)
SDM66117.1Protein of unknown function. (417 aa)
SDM66086.1Bifunctional DNA primase/polymerase, N-terminal. (298 aa)
rplYLarge subunit ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. (201 aa)
SDM65155.1Hypothetical protein. (295 aa)
SDM64901.1Carbonic anhydrase or acetyltransferase, isoleucine patch superfamily. (198 aa)
SDM57662.1Uncharacterized HhH-GPD family protein. (193 aa)
gyrBDNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (691 aa)
recFDNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. (374 aa)
rpmHLSU ribosomal protein L34P; Belongs to the bacterial ribosomal protein bL34 family. (45 aa)
SDM60387.1Chromosome segregation ATPase. (276 aa)
SDM60364.1Chromosome partitioning protein, ParB family; Belongs to the ParB family. (360 aa)
rpsFSSU ribosomal protein S6P; Binds together with S18 to 16S ribosomal RNA. (96 aa)
rpsRSSU ribosomal protein S18P; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. (78 aa)
SDM59904.1Primary replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. (495 aa)
SDM50358.1Osmoprotectant transport system permease protein. (224 aa)
SDM52974.1RNA polymerase-binding transcription factor DksA. (108 aa)
SDM52956.1RNA polymerase-binding transcription factor DksA. (137 aa)
SDM52878.1Protein of unknown function. (252 aa)
rpmJLarge subunit ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family. (40 aa)
rpmGLarge subunit ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family. (54 aa)
gvpA-2Gas vesicle protein; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. GvpA type proteins form the essential core of the structure. (157 aa)
SDM51711.1Gas vesicle synthesis protein GvpL/GvpF. (237 aa)
SDM51667.1Gas vesicle protein; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. (162 aa)
SDM51655.1Gas vesicle synthesis protein GvpL/GvpF. (311 aa)
SDM51633.1Gas vesicle protein. (101 aa)
SDM51611.1Gas vesicle protein K. (135 aa)
gvpAGas vesicle protein; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. GvpA type proteins form the essential core of the structure. (140 aa)
SDM51538.1Gas vesicle synthesis protein GvpL/GvpF. (238 aa)
SDM51463.1Gas vesicle protein; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. (104 aa)
SDM51442.1Gas vesicle synthesis protein GvpL/GvpF. (285 aa)
SDM51430.1Gas vesicle protein. (98 aa)
SDM51410.1Gas vesicle protein K. (93 aa)
SDM42722.1Carbonic anhydrase or acetyltransferase, isoleucine patch superfamily. (178 aa)
SDM42123.1Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase. (160 aa)
SDM46647.1Amino acid adenylation domain-containing protein. (1100 aa)
SDM45508.1RNA polymerase-binding transcription factor DksA. (132 aa)
SDM45124.1Multiple sugar transport system substrate-binding protein. (449 aa)
SDM44371.1Nitric-oxide synthase. (436 aa)
SDM44010.1Helicase conserved C-terminal domain-containing protein. (837 aa)
rplULSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. (106 aa)
obgGTP-binding protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. (478 aa)
SDM28817.1Electron transfer DM13. (183 aa)
SDM28505.1AAA ATPase domain-containing protein. (1286 aa)
SDM27719.1Serine/threonine protein kinase. (548 aa)
topADNA topoisomerase-1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] (954 aa)
SDM32106.1Type II secretion system (T2SS), protein F. (194 aa)
SDM32091.1Tight adherence protein B. (284 aa)
SDM32077.1Pilus assembly protein CpaF. (382 aa)
nthEndonuclease-3; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. (367 aa)
SDM31670.1Predicted phosphohydrolase, MPP superfamily. (275 aa)
recRDNA replication and repair protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. (199 aa)
SDM31324.1Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. (113 aa)
kynUKynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively. (405 aa)
SDM30282.1Yip1 domain-containing protein. (340 aa)
SDM19215.1Hypothetical protein. (436 aa)
SDM23487.1Hypothetical protein. (378 aa)
SDM18957.1Uncharacterized conserved protein, AIM24 family. (197 aa)
SDM18936.1Uncharacterized conserved protein, AIM24 family. (216 aa)
rpsBSSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family. (299 aa)
SDM18929.1Biogenesis AIM24. (257 aa)
rpsPSmall subunit ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. (146 aa)
smcCondensin subunit Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family. (1235 aa)
rpmF-2LSU ribosomal protein L32P; Belongs to the bacterial ribosomal protein bL32 family. (57 aa)
rpmBLSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family. (61 aa)
SDM18540.1ATP:cob(I)alamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family. (190 aa)
SDM22007.1DNA-binding protein HU-beta; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. (205 aa)
SDM20955.1Regulatory protein, luxR family. (1034 aa)
SDM10860.1L-fuculose-phosphate aldolase. (223 aa)
SDL74429.1Sigma 54 modulation/S30EA ribosomal protein C terminus. (263 aa)
SDL75100.1Ketoacyl-synthetase C-terminal extension. (947 aa)
SDL76462.1N-acetylglucosamine transport system substrate-binding protein. (483 aa)
SDL77014.1Predicted outer membrane protein. (260 aa)
SDL79206.1Hypothetical protein. (259 aa)
SDL79858.1Xylobiose transport system substrate-binding protein. (435 aa)
rpmFLarge subunit ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. (56 aa)
SDL80432.1Phytoene desaturase. (550 aa)
SDL73025.1ADP-ribosylglycohydrolase. (302 aa)
SDL73171.1ATP-dependent DNA helicase RecQ. (112 aa)
SDL73182.1ATP-dependent DNA helicase RecQ. (78 aa)
SDL73283.1ATP-dependent DNA helicase RecQ. (740 aa)
SDL73459.1DNA topoisomerase IV subunit B. (705 aa)
SDL91737.1Pilus assembly protein CpaF. (446 aa)
SDL88476.1Hypothetical protein. (495 aa)
SDL94208.1Superfamily II DNA and RNA helicase; Belongs to the DEAD box helicase family. (542 aa)
SDL94840.1Uncharacterized conserved protein, AIM24 family. (226 aa)
SDL94859.1Uncharacterized conserved protein, AIM24 family. (251 aa)
SDL95310.1Putative SOS response-associated peptidase YedK; Belongs to the SOS response-associated peptidase family. (271 aa)
SDL95925.1Cyclic nucleotide-binding domain-containing protein. (474 aa)
SDL96669.1AAA domain (dynein-related subfamily). (338 aa)
SDL97552.1Multiple sugar transport system substrate-binding protein. (420 aa)
SDL89178.1Sialic acid synthase SpsE, contains C-terminal SAF domain. (309 aa)
SDL89684.1Uridine kinase. (205 aa)
SDM04878.1Alpha-glucoside transport system substrate-binding protein. (441 aa)
SDM02063.1Uridine kinase. (252 aa)
SDM02653.1Phytoene dehydrogenase-related protein. (521 aa)
SDM12147.1Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase. (142 aa)
Your Current Organism:
Streptomyces wuyuanensis
NCBI taxonomy Id: 1196353
Other names: CGMCC 4.7042, KCTC 29112, S. wuyuanensis, Streptomyces sp. FX61, Streptomyces wuyuanensis Zhang et al. 2013, strain FX61
Server load: low (14%) [HD]