Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| NCS2 | NCS6 | A0A1U7LVK5 | A0A1U7LV33 | Cytoplasmic tRNA 2-thiolation protein 2; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). May act by forming a heterodimer with NCS6 that ligates sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position. Prior mcm(5) tRNA modification by the elongator complex is required for 2-thiolation. May also be involved in protein urmylation. | Cytoplasmic tRNA 2-thiolation protein 1; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position. Prior mcm(5) tRNA modification by the elongator complex is required for 2-thiolation. May also be involved in protein urmylation. | 0.996 |
| NCS2 | NEOLI_003023 | A0A1U7LVK5 | A0A1U7LGG1 | Cytoplasmic tRNA 2-thiolation protein 2; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). May act by forming a heterodimer with NCS6 that ligates sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position. Prior mcm(5) tRNA modification by the elongator complex is required for 2-thiolation. May also be involved in protein urmylation. | RCC1 repeat-containing protein. | 0.531 |
| NCS2 | NEOLI_004511 | A0A1U7LVK5 | A0A1U7LNQ4 | Cytoplasmic tRNA 2-thiolation protein 2; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). May act by forming a heterodimer with NCS6 that ligates sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position. Prior mcm(5) tRNA modification by the elongator complex is required for 2-thiolation. May also be involved in protein urmylation. | Adenylyltransferase and sulfurtransferase uba4. | 0.722 |
| NCS6 | NCS2 | A0A1U7LV33 | A0A1U7LVK5 | Cytoplasmic tRNA 2-thiolation protein 1; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position. Prior mcm(5) tRNA modification by the elongator complex is required for 2-thiolation. May also be involved in protein urmylation. | Cytoplasmic tRNA 2-thiolation protein 2; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). May act by forming a heterodimer with NCS6 that ligates sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position. Prior mcm(5) tRNA modification by the elongator complex is required for 2-thiolation. May also be involved in protein urmylation. | 0.996 |
| NCS6 | NEOLI_004511 | A0A1U7LV33 | A0A1U7LNQ4 | Cytoplasmic tRNA 2-thiolation protein 1; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position. Prior mcm(5) tRNA modification by the elongator complex is required for 2-thiolation. May also be involved in protein urmylation. | Adenylyltransferase and sulfurtransferase uba4. | 0.780 |
| NEOLI_000024 | NEOLI_000088 | A0A1U7LWK7 | A0A1U7LVC8 | E3 SUMO-protein ligase pli1. | LON peptidase N-terminal domain and RING finger protein. | 0.622 |
| NEOLI_000024 | NEOLI_000160 | A0A1U7LWK7 | A0A1U7LTJ6 | E3 SUMO-protein ligase pli1. | E3 ubiquitin-protein ligase DMA2. | 0.554 |
| NEOLI_000024 | NEOLI_000168 | A0A1U7LWK7 | A0A1U7LTJ2 | E3 SUMO-protein ligase pli1. | Cullin-4; Belongs to the cullin family. | 0.638 |
| NEOLI_000024 | NEOLI_000582 | A0A1U7LWK7 | A0A1U7LKJ5 | E3 SUMO-protein ligase pli1. | Ubiquitin-conjugating enzyme E2 2; Belongs to the ubiquitin-conjugating enzyme family. | 0.812 |
| NEOLI_000024 | NEOLI_000600 | A0A1U7LWK7 | A0A1U7LR48 | E3 SUMO-protein ligase pli1. | DNA repair protein RAD5. | 0.606 |
| NEOLI_000024 | NEOLI_000731 | A0A1U7LWK7 | A0A1U7LW82 | E3 SUMO-protein ligase pli1. | Ubiquitin-conjugating enzyme E2 1. | 0.791 |
| NEOLI_000024 | NEOLI_000929 | A0A1U7LWK7 | A0A1U7LWA6 | E3 SUMO-protein ligase pli1. | Peroxisome biogenesis factor 10. | 0.528 |
| NEOLI_000024 | NEOLI_001086 | A0A1U7LWK7 | A0A1U7LGB2 | E3 SUMO-protein ligase pli1. | Ubiquitin-activating enzyme E1-like; Belongs to the ubiquitin-activating E1 family. | 0.424 |
| NEOLI_000024 | NEOLI_001113 | A0A1U7LWK7 | A0A1U7LUY3 | E3 SUMO-protein ligase pli1. | Ubiquitin-conjugating enzyme E2 35; Belongs to the ubiquitin-conjugating enzyme family. | 0.855 |
| NEOLI_000024 | NEOLI_001906 | A0A1U7LWK7 | A0A1U7LQ18 | E3 SUMO-protein ligase pli1. | Putative RING finger protein. | 0.622 |
| NEOLI_000024 | NEOLI_001909 | A0A1U7LWK7 | A0A1U7LPU2 | E3 SUMO-protein ligase pli1. | F-box only protein 21. | 0.606 |
| NEOLI_000024 | NEOLI_002079 | A0A1U7LWK7 | A0A1U7LSF2 | E3 SUMO-protein ligase pli1. | Ubiquitin-like protein pmt3/smt3. | 0.961 |
| NEOLI_000024 | NEOLI_002196 | A0A1U7LWK7 | A0A1U7LWJ9 | E3 SUMO-protein ligase pli1. | E3 SUMO-protein ligase NSE2. | 0.763 |
| NEOLI_000024 | NEOLI_002232 | A0A1U7LWK7 | A0A1U7LRB9 | E3 SUMO-protein ligase pli1. | SUMO-conjugating enzyme ubc9. | 0.973 |
| NEOLI_000024 | NEOLI_002400 | A0A1U7LWK7 | A0A1U7LJQ1 | E3 SUMO-protein ligase pli1. | RING-box protein 1. | 0.677 |
page 1 of 162