STRINGSTRING
BN140_0805 BN140_0805 BN140_0807 BN140_0807 BN140_0808 BN140_0808 BN140_0809 BN140_0809 BN140_1082 BN140_1082 BN140_1083 BN140_1083 BN140_1086 BN140_1086 BN140_1087 BN140_1087 mazF mazF BN140_1089 BN140_1089 BN140_1090 BN140_1090 BN140_1091 BN140_1091 BN140_1101 BN140_1101 BN140_1102 BN140_1102 BN140_1103 BN140_1103 BN140_1104 BN140_1104 BN140_1105 BN140_1105 BN140_1421 BN140_1421 aroD aroD proG proG BN140_2046 BN140_2046 BN140_2047 BN140_2047 BN140_2441 BN140_2441 BN140_2443 BN140_2443
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BN140_0805Transcriptional regulator, HxlR family; Helix-turn-helix, HxlR type, Hypothetical protein (DUF2513); Hypothetical protein. (119 aa)
BN140_0807Hypothetical protein. (200 aa)
BN140_0808Hypothetical protein. (80 aa)
BN140_0809Uncharacterised protein family UPF0150. (82 aa)
BN140_1082Uncharacterised protein family UPF0395, YcfA-like protein. (61 aa)
BN140_1083Uncharacterised protein family UPF0150. (75 aa)
BN140_1086Transcription regulator with Winged helix DNA-binding domain; Hypothetical protein. (113 aa)
BN140_1087Hypothetical protein. (176 aa)
mazFGrowth inhibitor MazF; PemK-like protein; Hypothetical protein. (111 aa)
BN140_1089Uncharacterised protein family UPF0150. (73 aa)
BN140_1090Uncharacterised protein family UPF0150. (78 aa)
BN140_1091Hypothetical protein. (42 aa)
BN140_1101Hypothetical protein. (72 aa)
BN140_1102Hypothetical protein. (70 aa)
BN140_1103Transcriptional regulator, ArsR family; Winged helix DNA-binding domain; Hypothetical protein. (113 aa)
BN140_1104Hypothetical protein. (179 aa)
BN140_1105PemK-like protein. (111 aa)
BN140_1421CopG family transcriptional regulator, nickel-responsive regulator; Transcriptional regulator; Belongs to the transcriptional regulatory CopG/NikR family. (140 aa)
aroD3-dehydroquinate dehydratase I; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the type-I 3-dehydroquinase family. (209 aa)
proGCompetence protein ComER; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. (266 aa)
BN140_2046Uncharacterised protein family UPF0395. (74 aa)
BN140_2047Uncharacterised protein family UPF0150; Conserved hypothetical protein. (77 aa)
BN140_2441Transcriptional regulator, HxlR family; Helix-turn-helix, HxlR type, HxlR-like helix-turn-helix; Conserved hypothetical protein. (130 aa)
BN140_2443Nucleotidyltransferases; Nucleotidyltransferase domain; Conserved hypothetical protein. (101 aa)
Your Current Organism:
Methanoculleus bourgensis
NCBI taxonomy Id: 1201294
Other names: M. bourgensis MS2, Methanoculleus bourgensis DSM 3045, Methanoculleus bourgensis MS2
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