STRINGSTRING
BN140_0034 BN140_0034 sdhB sdhB sdhA sdhA nadB nadB arcC arcC mch1 mch1 prsA prsA pgk1 pgk1 cofH1 cofH1 BN140_0234 BN140_0234 BN140_0235 BN140_0235 nifH nifH prk prk apgM apgM BN140_0431 BN140_0431 gpi1 gpi1 lpd lpd lysA lysA argD argD serA serA ppsA1 ppsA1 cofG cofG cofC cofC folD folD glyA glyA gltX gltX eno eno thrC3 thrC3 porB1 porB1 porA1 porA1 porD1 porD1 porG porG hps hps cobB cobB BN140_0718 BN140_0718 BN140_0719 BN140_0719 cbiX cbiX hdrA1 hdrA1 fdhB fdhB fdhA fdhA mdhA mdhA sucD sucD sucC sucC korG korG korB korB korA korA korD korD fumB fumB fumA fumA BN140_0978 BN140_0978 BN140_1067 BN140_1067 fae-hps fae-hps manB manB acyP acyP paaK paaK paaK2 paaK2 BN140_1140 BN140_1140 asd asd dapB dapB dapA dapA argE argE BN140_1177 BN140_1177 mttC mttC fwdD1 fwdD1 fwdB1 fwdB1 fwdA1 fwdA1 fwdC1 fwdC1 BN140_1296 BN140_1296 fbpA fbpA BN140_1312 BN140_1312 rpiA rpiA fdhA1 fdhA1 fdhB1 fdhB1 fdhA2 fdhA2 fdhB2 fdhB2 porB3 porB3 porA3 porA3 porC porC porD3 porD3 ubiX ubiX cofD1 cofD1 cofD2 cofD2 dapF dapF frhA frhA frhD1 frhD1 frhG frhG frhB frhB ppcA ppcA cofH3 cofH3 mcrA1 mcrA1 mcrG1 mcrG1 mcrD1 mcrD1 mcrB1 mcrB1 fwdD3 fwdD3 fwdB3 fwdB3 fwdA3 fwdA3 fwdC3 fwdC3 glnA1 glnA1 BN140_1566 BN140_1566 BN140_1621 BN140_1621 hemD hemD mer mer mtd mtd leuD3 leuD3 leuC3 leuC3 aksA aksA ftr ftr BN140_1724 BN140_1724 BN140_1725 BN140_1725 hdrC hdrC hdrB hdrB hdrA3 hdrA3 MvhD MvhD fwdD5 fwdD5 fwdB5 fwdB5 fwdA5 fwdA5 fwdC5 fwdC5 mcrB3 mcrB3 mcrD3 mcrD3 mcrC mcrC mcrG3 mcrG3 mcrA3 mcrA3 mtrE mtrE mtrD mtrD mtrC mtrC mtrB mtrB mtrA1 mtrA1 mtrF mtrF mtrA2 mtrA2 mtrH mtrH mch3 mch3 BN140_1814 BN140_1814 BN140_1824 BN140_1824 mvhG mvhG mvhA mvhA BN140_1902 BN140_1902 BN140_1906 BN140_1906 cysG cysG hemA hemA hemB hemB hemL hemL hemC hemC hemX hemX BN140_1940 BN140_1940 pycB pycB pycA pycA gltD gltD tpiA tpiA fbaA1 fbaA1 fbaA3 fbaA3 gpi3 gpi3 rbcL rbcL ppsA3 ppsA3 ldhA ldhA gapA gapA gpmA gpmA pgk3 pgk3 pfkA pfkA BN140_2190 BN140_2190 BN140_2192 BN140_2192 fdhB3 fdhB3 fdhA3 fdhA3 fmdE fmdE BN140_2234 BN140_2234 BN140_2246 BN140_2246 pfp pfp cooS cooS BN140_2354 BN140_2354 frhD3 frhD3 acsC acsC acsD acsD acsB acsB BN140_2383 BN140_2383 BN140_2388 BN140_2388 BN140_2389 BN140_2389 glnA3 glnA3 pyk pyk BN140_2501 BN140_2501 fwdE fwdE ldh ldh BN140_2598 BN140_2598 gap gap BN140_3013 BN140_3013 leuB3 leuB3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BN140_0034acetate-CoA ligase. (629 aa)
sdhBSuccinate dehydrogenase and fumarate reductase iron-sulfur protein; Hypothetical protein. (487 aa)
sdhA1.3.99.1, Part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex; Hypothetical protein. (554 aa)
nadBAspartate kinase; Catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; Hypothetical protein; Belongs to the aspartokinase family. (462 aa)
arcCCarbamate kinase; Catalyzes the reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP; Hypothetical protein; Belongs to the carbamate kinase family. (314 aa)
mch1Methenyltetrahydromethanopterin cyclohydrolase; Catalyzes the reversible interconversion of 5-formyl-H(4)MPT to methenyl-H(4)MPT(+); Belongs to the MCH family. (314 aa)
prsARibose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P). (285 aa)
pgk1Phosphoglycerate kinase; High confidence in function and specificity; Belongs to the phosphoglycerate kinase family. (404 aa)
cofH1FO synthase, subunit 2-like, Radical SAM superfamily; High confidence in function and specificity. (362 aa)
BN140_02342-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate, Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; High confidence in function and specificity. (294 aa)
BN140_02352-oxoacid:acceptor oxidoreductase, alpha subunit, Pyruvate ferredoxin/flavodoxin oxidoreductase; High confidence in function and specificity. (604 aa)
nifHNitrogenase iron protein, subunit NifH/Protochlorophyllide reductase, subunit ChlL; High confidence in function and specificity; Belongs to the NifH/BchL/ChlL family. (272 aa)
prkPhosphoribulokinase/uridine kinase, Type II/IV secretion system protein; High confidence in function and specificity. (327 aa)
apgMPhosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (411 aa)
BN140_04315'-Nucleotidase/apyrase, 5'-nucleotidase, C-terminal domain; High confidence in function and specificity. (479 aa)
gpi1Glucose-6-phosphate isomerase, prokaryote; High confidence in function and specificity. (240 aa)
lpdDihydrolipoamide dehydrogenase; Pyridine nucleotide-disulphide oxidoreductase; High confidence in function and specificity. (441 aa)
lysADiaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. (430 aa)
argDacetylornithine/N- succinyldiaminopimelateaminotransferase; 2.6.1.17], Acetylornithine/Succinylornithine aminotransferase, Aminotransferase class-III; High confidence in function and specificity; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (374 aa)
serAD-3-phosphoglycerate dehydrogenase, D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; High confidence in function and specificity. (527 aa)
ppsA1Pyruvate, water dikinase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family. (768 aa)
cofGFO synthase subunit 1; Catalyzes the radical-mediated synthesis of 7,8-didemethyl-8- hydroxy-5-deazariboflavin (FO) from 5-amino-5-(4-hydroxybenzyl)-6-(D- ribitylimino)-5,6-dihydrouracil. (328 aa)
cofCHypothetical protein; Guanylyltransferase that catalyzes the activation of phosphoenolpyruvate (PEP) as enolpyruvoyl-2-diphospho-5'-guanosine, via the condensation of PEP with GTP. It is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor; Belongs to the CofC family. (215 aa)
folDMethylenetetrahydrofolate dehydrogenase (NADP+); Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. (283 aa)
glyASerine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. Also exhibits THF-independent aldolase activity toward beta- hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. (423 aa)
gltXglutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu). (561 aa)
enoEnolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. (395 aa)
thrC3Threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine. (400 aa)
porB1Pyruvate ferredoxin oxidoreductase, beta subunit; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; High confidence in function and specificity. (303 aa)
porA1Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal, Transketolase, C-terminal domain, I; High confidence in function and specificity. (384 aa)
porD12-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate; High confidence in function and specificity. (86 aa)
porG2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate; High confidence in function and specificity. (181 aa)
hps6-phospho-3-hexuloisomerase; 6-phospho 3-hexuloisomerase, SIS domain; High confidence in function and specificity. (205 aa)
cobBCobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source. Involved in the biosynthesis of the unique nickel-containing tetrapyrrole coenzyme F430, the prosthetic group of methyl-coenzyme M reductase (MCR), which plays a key role in methanogenesis and anaerobic methane oxidation. Catalyzes the ATP- dependent amidation of the two carboxylate groups at positions a and c of Ni-sirohydrochlorin, using L-glutamine or ammonia as the nitrogen source. (456 aa)
BN140_0718Hypothetical protein; Putative methanogenesis marker 13 metalloprotein, Nitrogenase component 1 type Oxidoreductase; High confidence in function and specificity. (354 aa)
BN140_0719Hypothetical protein; Uroporphyrinogen-III synthase HemD; High confidence in function and specificity. (386 aa)
cbiXSirohydrochlorin cobaltochelatase; Cobalamin (vitamin B12) biosynthesis CbiX, Ferrochelatase; High confidence in function and specificity. (130 aa)
hdrA1Heterodisulfide reductase subunit A; Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B). (424 aa)
fdhBCoenzyme F420 hydrogenase/dehydrogenase beta subunit, C-terminal, N-term; High confidence in function and specificity. (422 aa)
fdhAFormate dehydrogenase, alpha subunit, Molybdopterin oxidoreductase; High confidence in function and specificity. (687 aa)
mdhAL-lactate/malate dehydrogenase, lactate/malate dehydrogenase, NAD binding domain; High confidence in function and specificity; Belongs to the LDH/MDH superfamily. (288 aa)
sucDsuccinyl-CoA synthetase alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (288 aa)
sucCSuccinyl-CoA synthetase, beta subunit, ATP-grasp domain; High confidence in function and specificity. (361 aa)
korG2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate; High confidence in function and specificity. (176 aa)
korB2-oxoglutarate ferredoxin oxidoreductase subunit beta; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; High confidence in function and specificity. (262 aa)
korA2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal, domain; High confidence in function and specificity. (360 aa)
korD2-oxoglutarate ferredoxin oxidoreductase subunit delta; 4Fe-4S ferredoxin, iron-sulpur binding domain, putative zinc ribbon domain; High confidence in function and specificity. (90 aa)
fumBFe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain, Fumarase C-terminus; High confidence in function and specificity. (180 aa)
fumAFe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain, Fumarate hydratase (Fumerase); High confidence in function and specificity. (279 aa)
BN140_09783-hydroxypropionyl-CoA synthase; AMP-dependent synthetase/ligase, AMP-binding enzyme; High confidence in function and specificity. (577 aa)
BN140_1067Nitrite/sulphite reductase 4Fe-4S domain; Specificity unclear. (293 aa)
fae-hps3-hexulose-6-phosphate synthase; Catalyzes the condensation of formaldehyde with tetrahydromethanopterin (H(4)MPT) to 5,10- methylenetetrahydromethanopterin; In the N-terminal section; belongs to the formaldehyde- activating enzyme family. (393 aa)
manBPhosphoglucomutase/phosphomannomutase; 5.4.2.8, This archaeal PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates; Hypothetical protein. (453 aa)
acyPAcylphosphatase. (95 aa)
paaKCoenzyme F390 synthetase; Putative phenylacetate-CoA ligase; Hypothetical protein. (429 aa)
paaK2Coenzyme F390 synthetase; Putative phenylacetate-CoA ligase; Hypothetical protein. (433 aa)
BN140_11403-hexulose-6-phosphate synthase. (429 aa)
asdAspartate-semialdehyde dehydrogenase; Catalyzes the formation of aspartate semialdehyde from aspartyl phosphate; High confidence in function and specificity. (338 aa)
dapBDihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. (252 aa)
dapADihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). (291 aa)
argEAcetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase; High confidence in function and specificity. (389 aa)
BN140_11776-phospho-3-hexuloisomerase; 6-phospho 3-hexuloisomerase, SIS domain; High confidence in function and specificity. (199 aa)
mttC5-methyltetrahydrofolate- homocysteinemethyltransferase; B12 binding domain; High confidence in function and specificity. (225 aa)
fwdD1Formylmethanofuran dehydrogenase, subunit D, Molydopterin dinucleotide binding domain; High confidence in function and specificity. (129 aa)
fwdB1Formylmethanofuran dehydrogenase, subunit B, Molybdopterin oxidoreductase; High confidence in function and specificity. (429 aa)
fwdA1Formylmethanofuran dehydrogenase, subunit A; High confidence in function and specificity. (566 aa)
fwdC1Formylmethanofuran dehydrogenase subunit C, Septum formation inhibitor MinC, C-terminal domain; High confidence in function and specificity. (256 aa)
BN140_1296Alkylhydroperoxidase; Carboxymuconolactone decarboxylase family; Hypothetical protein. (139 aa)
fbpAFructose-1,6-bisphosphatase; Catalyzes two subsequent steps in gluconeogenesis: the aldol condensation of dihydroxyacetone phosphate (DHAP) and glyceraldehyde-3- phosphate (GA3P) to fructose-1,6-bisphosphate (FBP), and the dephosphorylation of FBP to fructose-6-phosphate (F6P). (365 aa)
BN140_1312acetate-CoA ligase. (632 aa)
rpiARibose 5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. (232 aa)
fdhA1Formate dehydrogenase, alpha subunit, Molybdopterin oxidoreductase; High confidence in function and specificity. (688 aa)
fdhB1Coenzyme F420 hydrogenase/dehydrogenase beta subunit, C-terminal; High confidence in function and specificity. (383 aa)
fdhA2Formate dehydrogenase, alpha subunit, Molybdopterin oxidoreductase; High confidence in function and specificity. (688 aa)
fdhB2Coenzyme F420 hydrogenase/dehydrogenase beta subunit, C-terminal, N-term; High confidence in function and specificity. (412 aa)
porB3Pyruvate ferredoxin oxidoreductase, beta subunit; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; High confidence in function and specificity. (317 aa)
porA3Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal, 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal; High confidence in function and specificity. (370 aa)
porC2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate; High confidence in function and specificity. (175 aa)
porD32-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate; High confidence in function and specificity. (81 aa)
ubiX3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. (181 aa)
cofD1LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052, Uncharacterised protein family UPF0052; High confidence in function and specificity. (301 aa)
cofD2LPPG:FO 2-phospho-L-lactate transferase; Catalyzes the transfer of the phosphoenolpyruvate moiety from enoylpyruvoyl-2-diphospho-5'-guanosine (EPPG) to 7,8-didemethyl-8- hydroxy-5-deazariboflavin (FO) with the formation of dehydro coenzyme F420-0 and GMP. (301 aa)
dapFDiaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine. (272 aa)
frhACoenzyme F420 hydrogenase, subunit alpha, Nickel-dependent hydrogenase; High confidence in function and specificity; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family. (455 aa)
frhD1Peptidase A31, coenzyme F420-reducing hydrogenase delta subunit, Hydrogenase maturation protease; High confidence in function and specificity. (183 aa)
frhGCoenzyme F420 hydrogenase, subunit gamma, PorD_KorD: 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate family; High confidence in function and specificity. (253 aa)
frhBCoenzyme F420 hydrogenase, subunit beta, Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus; High confidence in function and specificity. (295 aa)
ppcAPhosphoenolpyruvate carboxylase; Catalyzes the irreversible beta-carboxylation of phosphoenolpyruvate (PEP) to form oxaloacetate (OAA), a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle. Belongs to the PEPCase type 2 family. (485 aa)
cofH37, 8-didemethyl-8-hydroxy-5-deazariboflavinsynthase; Catalyzes the radical-mediated synthesis of 5-amino-5-(4- hydroxybenzyl)-6-(D-ribitylimino)-5,6-dihydrouracil from 5-amino-6-(D- ribitylamino)uracil and L-tyrosine. (376 aa)
mcrA1Methyl-coenzyme M reductase alpha subunit; Component of the methyl-coenzyme M reductase (MCR) I that catalyzes the reductive cleavage of methyl-coenzyme M (CoM-S-CH3 or 2- (methylthio)ethanesulfonate) using coenzyme B (CoB or 7- mercaptoheptanoylthreonine phosphate) as reductant which results in the production of methane and the mixed heterodisulfide of CoB and CoM (CoM-S-S-CoB). This is the final step in methanogenesis. (568 aa)
mcrG1Methyl-coenzyme M reductase, gamma subunit; High confidence in function and specificity. (254 aa)
mcrD1Methyl-coenzyme M reductase operon protein D; Specificity unclear. (199 aa)
mcrB1Methyl-coenzyme M reductase, beta subunit; High confidence in function and specificity. (434 aa)
fwdD3Formylmethanofuran dehydrogenase subunit D; Molydopterin dinucleotide binding domain; High confidence in function and specificity. (113 aa)
fwdB3Formylmethanofuran dehydrogenase, subunit B, Molybdopterin oxidoreductase; High confidence in function and specificity. (455 aa)
fwdA3Formylmethanofuran dehydrogenase, subunit A, Amidohydrolase family; High confidence in function and specificity. (570 aa)
fwdC3Formylmethanofuran dehydrogenase subunit C; High confidence in function and specificity. (266 aa)
glnA1Glutamine synthetase, catalytic domain; High confidence in function and specificity. (443 aa)
BN140_1566Coenzyme F420 hydrogenase/dehydrogenase beta subunit, C-terminal; High confidence in function and specificity. (339 aa)
BN140_1621ABC transporter ATP-binding protein; Methyl coenzyme M reductase system, component A2, IstB-like ATP binding protein; High confidence in function and specificity. (536 aa)
hemDTetrapyrrole biosynthesis, uroporphyrinogen III synthase, Uroporphyrinogen-III synthase HemD; High confidence in function and specificity. (226 aa)
merCoenzyme F420-dependent N5,N10-methenyltetrahydromethanopterin reductase; Catalyzes the reversible reduction of methylene-H(4)MPT to methyl-H(4)MPT; Belongs to the mer family. (330 aa)
mtdMethylenetetrahydromethanopterin dehydrogenase; Catalyzes the reversible reduction of methenyl-H(4)MPT(+) to methylene-H(4)MPT. (280 aa)
leuD34.2.1.35], 3-isopropylmalate dehydratase, small subunit, subgroup, Aconitate hydratase 2 N-terminus; High confidence in function and specificity. (157 aa)
leuC33-isopropylmalate/(R)-2-methylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. (403 aa)
aksA2-isopropylmalate synthase; Pyruvate carboxyltransferase; High confidence in function and specificity; Belongs to the alpha-IPM synthase/homocitrate synthase family. (376 aa)
ftrFormylmethanofuran-tetrahydromethanopterin N-formyltransferase; Catalyzes the reversible transfer of a formyl group from formylmethanofuran (formyl-MFR) to tetrahydromethanopterin (H(4)MPT) so as to produce 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) and methanofuran (MFR); Belongs to the FTR family. (302 aa)
BN140_1724Hypothetical protein; 4Fe-4S ferredoxin, iron-sulpur binding domain; High confidence in function and specificity. (90 aa)
BN140_1725Hypothetical protein; Formylmethanofuran dehydrogenase, subunit F, Pre-mRNA splicing factor PRP21 like protein; High confidence in function and specificity. (389 aa)
hdrCCoB-CoM heterodisulphide reductase, subunit C, 4Fe-4S binding domain; High confidence in function and specificity. (193 aa)
hdrBCoB-CoM heterodisulphide reductase, subunit B; High confidence in function and specificity. (299 aa)
hdrA3Heterodisulfide reductase subunit A; Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B). (674 aa)
MvhDMethyl-viologen-reducing hydrogenase, delta subunit; High confidence in function and specificity. (141 aa)
fwdD5Formylmethanofuran dehydrogenase, subunit D, Molydopterin dinucleotide binding domain; High confidence in function and specificity. (133 aa)
fwdB5Formylmethanofuran dehydrogenase, subunit B, Molybdopterin oxidoreductase; High confidence in function and specificity. (437 aa)
fwdA5Formylmethanofuran dehydrogenase, subunit A, Amidohydrolase family; High confidence in function and specificity. (569 aa)
fwdC5Formylmethanofuran dehydrogenase subunit C; High confidence in function and specificity. (268 aa)
mcrB3Ulfoethylthiotransferase beta, Methyl-coenzyme M reductase, beta subunit; High confidence in function and specificity. (434 aa)
mcrD3Methyl-coenzyme M reductase, protein D; Specificity unclear. (158 aa)
mcrCMethyl-coenzyme M reductase operon protein C; High confidence in function and specificity. (207 aa)
mcrG3Sulfoethylthiotransferase gamma;, Methyl-coenzyme M reductase, gamma subunit; High confidence in function and specificity. (253 aa)
mcrA3Methyl-coenzyme M reductase alpha subunit; Component of the methyl-coenzyme M reductase (MCR) I that catalyzes the reductive cleavage of methyl-coenzyme M (CoM-S-CH3 or 2- (methylthio)ethanesulfonate) using coenzyme B (CoB or 7- mercaptoheptanoylthreonine phosphate) as reductant which results in the production of methane and the mixed heterodisulfide of CoB and CoM (CoM-S-S-CoB). This is the final step in methanogenesis. (568 aa)
mtrETetrahydromethanopterin S-methyltransferase subunit E; Part of a complex that catalyzes the formation of methyl- coenzyme M and tetrahydromethanopterin from coenzyme M and methyl- tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step. (299 aa)
mtrDTetrahydromethanopterin S-methyltransferase subunit D; Part of a complex that catalyzes the formation of methyl- coenzyme M and tetrahydromethanopterin from coenzyme M and methyl- tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step. (283 aa)
mtrCTetrahydromethanopterin S-methyltransferase subunit C; Part of a complex that catalyzes the formation of methyl- coenzyme M and tetrahydromethanopterin from coenzyme M and methyl- tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step. (283 aa)
mtrBTetrahydromethanopterin S-methyltransferase subunit B; Part of a complex that catalyzes the formation of methyl- coenzyme M and tetrahydromethanopterin from coenzyme M and methyl- tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step. (94 aa)
mtrA1Tetrahydromethanopterin S-methyltransferase subunit A; Part of a complex that catalyzes the formation of methyl- coenzyme M and tetrahydromethanopterin from coenzyme M and methyl- tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step; Belongs to the MtrA family. (241 aa)
mtrFTetrahydromethanopterin S-methyltransferase, F subunit; Specificity unclear. (70 aa)
mtrA2Tetrahydromethanopterin S-methyltransferase subunit A; Part of a complex that catalyzes the formation of methyl- coenzyme M and tetrahydromethanopterin from coenzyme M and methyl- tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step; Belongs to the MtrA family. (246 aa)
mtrHTetrahydromethanopterin S-methyltransferase, MtrH subunit; High confidence in function and specificity. (345 aa)
mch3Methenyltetrahydromethanopterin cyclohydrolase; Catalyzes the reversible interconversion of 5-formyl-H(4)MPT to methenyl-H(4)MPT(+); Belongs to the MCH family. (315 aa)
BN140_1814Bisphosphoglycerate-independent phosphoglycerate mutase; High confidence in function and specificity. (408 aa)
BN140_1824F420-0:gamma-glutamyl ligase; High confidence in function and specificity. (249 aa)
mvhGCoenzyme F420-non-reducing hydrogenase (methyl viologen-reducing hydrogenase), gamma subunit; [NiFe]-hydrogenase-3-type complex, small subunit/NADH:quinone oxidoreductase, subunit NuoB, NADH ubiquinone oxidoreductase, 20 Kd subunit; High confidence in function and specificity. (306 aa)
mvhANickel-dependent hydrogenase, large subunit; High confidence in function and specificity; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family. (454 aa)
BN140_1902Homoserine dehydrogenase, catalytic, Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; High confidence in function and specificity. (329 aa)
BN140_1906Formaldehyde-activating enzyme; High confidence in function and specificity. (167 aa)
cysGPrecorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase; 4.99.1.4], Sirohaem synthase, N-terminal, Saccharopine dehydrogenase; High confidence in function and specificity. (208 aa)
hemAglutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). (423 aa)
hemBTetrapyrrole biosynthesis, porphobilinogen synthase, Delta-aminolevulinic acid dehydratase; High confidence in function and specificity; Belongs to the ALAD family. (327 aa)
hemLTetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase; High confidence in function and specificity; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. HemL subfamily. (415 aa)
hemCPorphobilinogen deaminase; Tetrapyrrole biosynthesis, hydroxymethylbilane synthase, Bacterial extracellular solute-binding proteins, family 3; High confidence in function and specificity. (294 aa)
hemXUroporphyrin-III C-methyltransferase, C-terminal; High confidence in function and specificity; Belongs to the precorrin methyltransferase family. (266 aa)
BN140_1940Class II aldolase/adducin, N-terminal; High confidence in function and specificity. (180 aa)
pycBOxaloacetate decarboxylase, alpha subunit, Conserved carboxylase domain; High confidence in function and specificity. (582 aa)
pycAPyruvate carboxylase subunit A; Biotin carboxylation domain, Carbamoyl-phosphate synthase L chain, N-terminal domain; High confidence in function and specificity. (491 aa)
gltDGlutamate synthase (NADPH/NADH) small chain; 1.4.1.14], Glutamate synthase (NADPH), homotetrameric, Nitrogenase component 1 type Oxidoreductase; High confidence in function and specificity. (447 aa)
tpiATriosephosphate isomerase (TIM); Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (222 aa)
fbaA1Fructose-bisphosphate aldolase, class I; Catalyzes a transaldol reaction between 6-deoxy-5- ketofructose 1-phosphate (DKFP) and L-aspartate semialdehyde (ASA) with an elimination of hydroxypyruvaldehyde phosphate to yield 2-amino-3,7- dideoxy-D-threo-hept-6-ulosonate (ADH). Plays a key role in an alternative pathway of the biosynthesis of 3-dehydroquinate (DHQ), which is involved in the canonical pathway for the biosynthesis of aromatic amino acids. (263 aa)
fbaA3Fructose-bisphosphate aldolase, class I; Catalyzes a transaldol reaction between 6-deoxy-5- ketofructose 1-phosphate (DKFP) and L-aspartate semialdehyde (ASA) with an elimination of hydroxypyruvaldehyde phosphate to yield 2-amino-3,7- dideoxy-D-threo-hept-6-ulosonate (ADH). Plays a key role in an alternative pathway of the biosynthesis of 3-dehydroquinate (DHQ), which is involved in the canonical pathway for the biosynthesis of aromatic amino acids. (260 aa)
gpi3Glucose-6-phosphate isomerase, prokaryote; High confidence in function and specificity. (232 aa)
rbcLRibulose bisophosphate carboxylase; Catalyzes the addition of molecular CO(2) and H(2)O to ribulose 1,5-bisphosphate (RuBP), generating two molecules of 3- phosphoglycerate (3-PGA). Functions in an archaeal AMP degradation pathway, together with AMP phosphorylase and R15P isomerase. Belongs to the RuBisCO large chain family. Type III subfamily. (430 aa)
ppsA3Pyruvate, water dikinase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family. (812 aa)
ldhAD-lactate dehydrogenase; NADP oxidoreductase coenzyme F420-dependent; High confidence in function and specificity; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (352 aa)
gapAGlyceraldehyde/Erythrose phosphate dehydrogenase family, Oxidoreductase family, NAD-binding Rossmann fold; High confidence in function and specificity; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (335 aa)
gpmAPhosphoglyceromutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (248 aa)
pgk3Phosphoglycerate kinase; High confidence in function and specificity; Belongs to the phosphoglycerate kinase family. (403 aa)
pfkA6-phosphofructokinase; ATP-dependent phosphofructokinase, prokaryotic; High confidence in function and specificity. (323 aa)
BN140_2190AMP-dependent synthetase/ligase, Domain of unknown function (DUF3448); High confidence in function and specificity. (627 aa)
BN140_2192Phosphoadenosine phosphosulfate reductase family; High confidence in function and specificity. (469 aa)
fdhB3Coenzyme F420 hydrogenase/dehydrogenase beta subunit, C-terminal, N-term; High confidence in function and specificity. (412 aa)
fdhA3Formate dehydrogenase, alpha subunit, Molybdopterin oxidoreductase; High confidence in function and specificity. (689 aa)
fmdEFormylmethanofuran dehydrogenase, subunit E domain, TFIIB zinc-binding; High confidence in function and specificity. (213 aa)
BN140_2234Acylphosphatase-like; Specificity unclear. (113 aa)
BN140_2246Fructose-bisphosphate aldolase, class I; DeoC/LacD family aldolase; High confidence in function and specificity. (306 aa)
pfp6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions. (344 aa)
cooSCarbon-monoxide dehydrogenase, catalytic subunit, Prismane/CO dehydrogenase family; High confidence in function and specificity. (636 aa)
BN140_2354Hypothetical protein; Formylmethanofuran dehydrogenase, subunit E domain, FmdE, Molybdenum formylmethanofuran dehydrogenase operon. (145 aa)
frhD3Coenzyme F420 hydrogenase delta subunit; Peptidase A31, hydrogen uptake protein, Hydrogenase maturation protease; Specificity unclear. (158 aa)
acsCAcetyl-CoA decarbonylase/synthase complex, gamma subunit, CO dehydrogenase/acetyl-CoA synthase delta subunit; High confidence in function and specificity. (444 aa)
acsDCO dehydrogenase/acetyl-CoA synthase delta subunit; High confidence in function and specificity. (303 aa)
acsBBifunctional acetyl-CoA decarbonylase/synthase complex subunit alpha/beta; In acetogenic organisms, this enzyme complex converts carbon dioxide to acetyl-CoA while in methanogenic organisms this enzyme is used to degrade acetyl-CoA to form methane and carbon dioxide; part of an enzyme complex; High confidence in function and specificity. (673 aa)
BN140_2383AMP-dependent synthetase/ligase; High confidence in function and specificity. (466 aa)
BN140_2388AMP-dependent synthetase/ligase; High confidence in function and specificity. (462 aa)
BN140_2389AMP-dependent synthetase/ligase; High confidence in function and specificity. (475 aa)
glnA3Glutamine synthetase, catalytic domain; High confidence in function and specificity. (501 aa)
pykPyruvate kinase, alpha/beta domain; High confidence in function and specificity; Belongs to the pyruvate kinase family. (499 aa)
BN140_2501acetyl-CoA C-acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; High confidence in function and specificity. (386 aa)
fwdEFormylmethanofuran dehydrogenase, subunit E domain, FmdE, Molybdenum formylmethanofuran dehydrogenase operon; High confidence in function and specificity. (214 aa)
ldhLactate/malate dehydrogenase, C-terminal; High confidence in function and specificity. (419 aa)
BN140_2598ROK, Glucokinase; High confidence in function and specificity. (322 aa)
gapGlyceraldehyde-3-phosphate dehydrogenase, type II, C-terminal domain; High confidence in function and specificity. (341 aa)
BN140_3013Coenzyme F420-0 gamma-glutamyl ligase. (268 aa)
leuB33-isopropylmalate dehydrogenase. (322 aa)
Your Current Organism:
Methanoculleus bourgensis
NCBI taxonomy Id: 1201294
Other names: M. bourgensis MS2, Methanoculleus bourgensis DSM 3045, Methanoculleus bourgensis MS2
Server load: low (14%) [HD]