STRINGSTRING
rpmE2 rpmE2 rpmB rpmB rpmB-2 rpmB-2 rpmE rpmE rpmE2-2 rpmE2-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rpmE2Ribosomal protein L31. (81 aa)
rpmBRibosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. (78 aa)
rpmB-2Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. (61 aa)
rpmERibosomal protein L31; Binds the 23S rRNA. (69 aa)
rpmE2-2Ribosomal protein L31. (81 aa)
Your Current Organism:
Nocardiopsis alba
NCBI taxonomy Id: 1205910
Other names: N. alba ATCC BAA-2165, Nocardiopsis alba ATCC BAA-2165, Nocardiopsis alba BE74
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