STRINGSTRING
BN7_1215 BN7_1215 BN7_6150 BN7_6150 BN7_1847 BN7_1847 BN7_6149 BN7_6149
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BN7_1215Polyadenylate-binding protein, cytoplasmic and nuclear. (267 aa)
BN7_61505'-3' exoribonuclease 1. (491 aa)
BN7_1847FFD domain-containing protein. (287 aa)
BN7_61495'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. (1519 aa)
Your Current Organism:
Wickerhamomyces ciferrii
NCBI taxonomy Id: 1206466
Other names: W. ciferrii NRRL Y-1031, Wickerhamomyces ciferrii NRRL Y-1031
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