STRINGSTRING
BN7_5285 BN7_5285 BN7_1891 BN7_1891 BN7_831 BN7_831 BN7_2808 BN7_2808 DIS3 DIS3 BN7_6150 BN7_6150 RPT2 RPT2 BN7_6655 BN7_6655 BN7_4617 BN7_4617 BN7_6149 BN7_6149 BN7_5674 BN7_5674 BN7_3618 BN7_3618 BN7_4933 BN7_4933 BN7_1949 BN7_1949
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BN7_5285Polyribonucleotide nucleotidyltransferase. (236 aa)
BN7_1891Polyribonucleotide nucleotidyltransferase. (383 aa)
BN7_831Uncharacterized protein. (264 aa)
BN7_2808HBS1-like protein. (664 aa)
DIS3Exosome complex exonuclease; Belongs to the RNR ribonuclease family. (984 aa)
BN7_61505'-3' exoribonuclease 1. (491 aa)
RPT226S protease regulatory subunit; Belongs to the AAA ATPase family. (395 aa)
BN7_6655Protein DOM34 homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (386 aa)
BN7_4617Polyribonucleotide nucleotidyltransferase. (245 aa)
BN7_61495'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. (1519 aa)
BN7_5674Ubiquitin fusion degradation protein 1. (320 aa)
BN7_3618Uncharacterized protein. (304 aa)
BN7_4933Cell division control protein; Belongs to the AAA ATPase family. (829 aa)
BN7_1949Polyribonucleotide nucleotidyltransferase. (221 aa)
Your Current Organism:
Wickerhamomyces ciferrii
NCBI taxonomy Id: 1206466
Other names: W. ciferrii NRRL Y-1031, Wickerhamomyces ciferrii NRRL Y-1031
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