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prmA prmA CDSE_0327 CDSE_0327 CDSE_0328 CDSE_0328 CDSE_0329 CDSE_0329 CDSE_0331 CDSE_0331 CDSE_0332 CDSE_0332 ybeY ybeY CDSE_0334 CDSE_0334 miaB miaB secF secF secD secD tgt tgt queA queA CDSE_0345 CDSE_0345 trmJ trmJ CDSE_0385 CDSE_0385 CDSE_0387 CDSE_0387 uppP uppP CDSE_0717 CDSE_0717 miaA miaA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
prmARibosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family. (299 aa)
CDSE_0327Magnesium transporter; Acts as a magnesium transporter. (473 aa)
CDSE_0328acyl-CoA thioesterase YciA; Lipid metabolism; SecretomeP prediction: 0.37; Protein involved in hydrolase activity. (134 aa)
CDSE_0329Myo-inositol-1(or 4)-monophosphatase; Carbohydrate transport and metabolism; SecretomeP prediction: 0.06; Protein involved in inositol monophosphate 1-phosphatase activity and hydrolase activity; Belongs to the inositol monophosphatase superfamily. (291 aa)
CDSE_0331SecretomeP prediction: 0.38; Protein involved in cell division. (289 aa)
CDSE_0332Magnesium and cobalt transporter; Inorganic ion transport and metabolism; SecretomeP prediction: 0.07. (284 aa)
ybeYPutative metal-dependent hydrolase; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. (165 aa)
CDSE_0334PhoH-like phosphate starvation-inducible protein; Signal transduction mechanisms; SecretomeP prediction: 0.16; Protein involved in ATP binding. (324 aa)
miaBBifunctional tRNA thiolation and methylation protein; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. (451 aa)
secFPreprotein translocase subunit SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. (311 aa)
secDPreprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. (610 aa)
tgtQueuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...] (376 aa)
queAS-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). (353 aa)
CDSE_0345Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. (246 aa)
trmJtRNA/rRNA methyltransferase; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA. (260 aa)
CDSE_0385Myo-inositol-1(or 4)-monophosphatase; Carbohydrate transport and metabolism; SecretomeP prediction: 0.09; Protein involved in hydrolase activity; Belongs to the inositol monophosphatase superfamily. (255 aa)
CDSE_0387Tellurium resistance membrane protein TerC; Inorganic ion transport and metabolism; SecretomeP prediction: 0.17. (521 aa)
uppPUndecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. (273 aa)
CDSE_0717N6-adenine-specific DNA methylase; DNA replication, recombination, and repair; SecretomeP prediction: 0.06; Protein involved in methylation; Belongs to the methyltransferase superfamily. (407 aa)
miaAtRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. (323 aa)
Your Current Organism:
Kinetoplastibacterium desouzaii
NCBI taxonomy Id: 1208919
Other names: C. Kinetoplastibacterium desouzaii TCC079E, Candidatus Kinetoplastibacterium desouzaii TCC079E
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