(60 nodes) Mixed, incl. Flavin monooxygenase-like, and Alpha/beta hydrolase fold-3 network (Colletotrichum orchidophilum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CORC01_13993	HK97 family phage prohead protease. (576 aa)
	CORC01_13926	Cupin domain-containing protein. (193 aa)
	CORC01_13796	Abhydrolase_3 domain-containing protein. (379 aa)
	CORC01_13016	Uncharacterized protein. (897 aa)
	CORC01_12863	Uncharacterized protein. (597 aa)
	CORC01_12829	Pyr_redox_2 domain-containing protein. (574 aa)
	CORC01_12632	EthD domain-containing protein. (109 aa)
	CORC01_12381	Cupin. (212 aa)
	CORC01_12249	Abhydrolase_3 domain-containing protein. (349 aa)
	CORC01_12259	Uncharacterized protein. (193 aa)
	CORC01_11633	Cupin_2 domain-containing protein. (184 aa)
	CORC01_11261	Abhydrolase_3 domain-containing protein. (304 aa)
	CORC01_11287	Abhydrolase_3 domain-containing protein. (347 aa)
	CORC01_11148	Uncharacterized protein. (637 aa)
	CORC01_10645	Uncharacterized protein. (577 aa)
	CORC01_10538	Thiol-specific monooxygenase; Belongs to the FMO family. (485 aa)
	CORC01_09908	Cyclohexanone monooxygenase. (668 aa)
	CORC01_09817	PhoD-like phosphatase. (627 aa)
	CORC01_09749	Alpha/beta hydrolase fold protein. (382 aa)
	CORC01_09612	Uncharacterized protein. (566 aa)
	CORC01_07142	Uncharacterized protein; Belongs to the FMO family. (517 aa)
	CORC01_06888	Monooxygenase. (162 aa)
	CORC01_06303	Abhydrolase_3 domain-containing protein. (739 aa)
	CORC01_06305	Uncharacterized protein. (513 aa)
	CORC01_06264	Uncharacterized protein. (683 aa)
	CORC01_06042	Flavin-containing monooxygenase. (608 aa)
	CORC01_06100	Phenylacetone monooxygenase. (553 aa)
	CORC01_06101	Abhydrolase_3 domain-containing protein. (351 aa)
	CORC01_06099	Lactamase_B domain-containing protein. (362 aa)
	CORC01_05720	Alpha/beta hydrolase fold-3 domain-containing protein. (329 aa)
	CORC01_05347	Abhydrolase_3 domain-containing protein. (329 aa)
	CORC01_05407	Abhydrolase_3 domain-containing protein. (333 aa)
	CORC01_05112	Cupin. (187 aa)
	CORC01_05111	FAD_binding_3 domain-containing protein. (713 aa)
	CORC01_04497	Abhydrolase_3 domain-containing protein. (491 aa)
	CORC01_03718	Abhydrolase_3 domain-containing protein. (336 aa)
	CORC01_03760	Uncharacterized protein. (492 aa)
	CORC01_03799	Dimethylaniline monooxygenase 2; Belongs to the FMO family. (532 aa)
	CORC01_03500	Abhydrolase_3 domain-containing protein. (329 aa)
	CORC01_03393	Phenylacetone monooxygenase. (583 aa)
	CORC01_02750	Metallo-beta-lactamase superfamily protein. (380 aa)
	CORC01_02621	Asp/Glu/Hydantoin racemase. (266 aa)
	CORC01_02683	Cofactor FMO1 FAD enzyme; Belongs to the FMO family. (590 aa)
	CORC01_02616	Uncharacterized protein. (491 aa)
	CORC01_02500	Uncharacterized protein; Belongs to the FMO family. (512 aa)
	CORC01_02207	Abhydrolase_3 domain-containing protein. (330 aa)
	CORC01_02222	Carbon-nitrogen hydrolase. (606 aa)
	CORC01_01938	Thiol-specific monooxygenase. (471 aa)
	CORC01_01968	PhoD-like phosphatase. (617 aa)
	CORC01_01478	Thiol-specific monooxygenase. (515 aa)
	CORC01_01502	Thiol-specific monooxygenase; Belongs to the FMO family. (556 aa)
	CORC01_00773	Uncharacterized protein; Belongs to the FMO family. (563 aa)
	CORC01_00730	Uncharacterized protein. (573 aa)
	CORC01_00699	Flavin-containing monooxygenase. (607 aa)
	CORC01_00418	PhoD-like phosphatase. (531 aa)
	CORC01_00501	Uncharacterized protein. (636 aa)
	CORC01_00548	Uncharacterized protein. (512 aa)
	CORC01_00385	Abhydrolase_3 domain-containing protein. (395 aa)
	CORC01_00025	Metallo-beta-lactamase superfamily protein. (321 aa)
	CORC01_00068	Phosphotransferase. (495 aa)

Your Current Organism:

Colletotrichum orchidophilum

NCBI taxonomy Id: 1209926
Other names: C. orchidophilum, CBS 632.80, Colletotrichum orchidophilum Damm, P.F. Cannon & Crous, 2012, Colletotrichum sp. UD-2012n

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CORC01_00385	CORC01_03500	A0A1G4BRY2	A0A1G4BIH2	Abhydrolase_3 domain-containing protein.	Abhydrolase_3 domain-containing protein.	0.519
CORC01_00385	CORC01_05720	A0A1G4BRY2	A0A1G4BCD3	Abhydrolase_3 domain-containing protein.	Alpha/beta hydrolase fold-3 domain-containing protein.	0.511
CORC01_00418	CORC01_01968	A0A1G4BRI6	A0A1G4BNG6	PhoD-like phosphatase.	PhoD-like phosphatase.	0.842
CORC01_00418	CORC01_09817	A0A1G4BRI6	A0A1G4B0F2	PhoD-like phosphatase.	PhoD-like phosphatase.	0.845
CORC01_01968	CORC01_00418	A0A1G4BNG6	A0A1G4BRI6	PhoD-like phosphatase.	PhoD-like phosphatase.	0.842
CORC01_01968	CORC01_09817	A0A1G4BNG6	A0A1G4B0F2	PhoD-like phosphatase.	PhoD-like phosphatase.	0.845
CORC01_02207	CORC01_09749	A0A1G4BM26	A0A1G4B0U0	Abhydrolase_3 domain-containing protein.	Alpha/beta hydrolase fold protein.	0.512
CORC01_03500	CORC01_00385	A0A1G4BIH2	A0A1G4BRY2	Abhydrolase_3 domain-containing protein.	Abhydrolase_3 domain-containing protein.	0.519
CORC01_03500	CORC01_09749	A0A1G4BIH2	A0A1G4B0U0	Abhydrolase_3 domain-containing protein.	Alpha/beta hydrolase fold protein.	0.514
CORC01_03500	CORC01_11261	A0A1G4BIH2	A0A1G4AWB1	Abhydrolase_3 domain-containing protein.	Abhydrolase_3 domain-containing protein.	0.530
CORC01_03718	CORC01_06100	A0A1G4BH91	A0A1G4BB49	Abhydrolase_3 domain-containing protein.	Phenylacetone monooxygenase.	0.476
CORC01_03718	CORC01_09612	A0A1G4BH91	A0A1G4B0Z1	Abhydrolase_3 domain-containing protein.	Uncharacterized protein.	0.432
CORC01_03718	CORC01_12829	A0A1G4BH91	A0A1G4ARZ3	Abhydrolase_3 domain-containing protein.	Pyr_redox_2 domain-containing protein.	0.416
CORC01_03718	CORC01_13993	A0A1G4BH91	A0A1G4ANL5	Abhydrolase_3 domain-containing protein.	HK97 family phage prohead protease.	0.406
CORC01_04497	CORC01_05407	A0A1G4BG32	A0A1G4BDF9	Abhydrolase_3 domain-containing protein.	Abhydrolase_3 domain-containing protein.	0.417
CORC01_04497	CORC01_05720	A0A1G4BG32	A0A1G4BCD3	Abhydrolase_3 domain-containing protein.	Alpha/beta hydrolase fold-3 domain-containing protein.	0.476
CORC01_04497	CORC01_11261	A0A1G4BG32	A0A1G4AWB1	Abhydrolase_3 domain-containing protein.	Abhydrolase_3 domain-containing protein.	0.480
CORC01_04497	CORC01_11287	A0A1G4BG32	A0A1G4AWI8	Abhydrolase_3 domain-containing protein.	Abhydrolase_3 domain-containing protein.	0.502
CORC01_04497	CORC01_12249	A0A1G4BG32	A0A1G4ATI5	Abhydrolase_3 domain-containing protein.	Abhydrolase_3 domain-containing protein.	0.440
CORC01_04497	CORC01_13796	A0A1G4BG32	A0A1G4AP76	Abhydrolase_3 domain-containing protein.	Abhydrolase_3 domain-containing protein.	0.455