19 items (Colletotrichum orchidophilum) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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textmining

co-expression

protein homology

Your Input:
	CORC01_13708	WD domain-containing protein. (511 aa)
	CORC01_12403	Histone H3; Belongs to the histone H3 family. (136 aa)
	CORC01_12324	Snf5/smarcb1/ini1. (580 aa)
	CORC01_10106	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
	CORC01_09634	Linker histone H1 and H5 family protein. (247 aa)
	CORC01_09599	Zn(2)-C6 fungal-type domain-containing protein. (762 aa)
	CORC01_07232	SET domain-containing protein. (1307 aa)
	CORC01_06194	Histone H2A; Belongs to the histone H2A family. (134 aa)
	CORC01_06193	Histone H2B; Belongs to the histone H2B family. (137 aa)
	CORC01_05473	Tat pathway signal sequence. (517 aa)
	CORC01_05161	BAH domain-containing protein. (456 aa)
	CORC01_04627	Histone H2A; Belongs to the histone H2A family. (141 aa)
	CORC01_04085	Histone H3-like centromeric protein cse-4. (134 aa)
	CORC01_04086	FUN14 family protein. (150 aa)
	CORC01_03222	Peptidase family M20/M25/M40 protein. (809 aa)
	CORC01_02723	PLU-1-like protein. (1734 aa)
	CORC01_02467	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (131 aa)
	CORC01_02368	JmjC domain-containing protein. (1757 aa)
	CORC01_00184	Uncharacterized protein. (89 aa)

Your Current Organism:

Colletotrichum orchidophilum

NCBI taxonomy Id: 1209926
Other names: C. orchidophilum, CBS 632.80, Colletotrichum orchidophilum Damm, P.F. Cannon & Crous, 2012, Colletotrichum sp. UD-2012n

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CORC01_00184	CORC01_02368	A0A1G4BS85	A0A1G4BM20	Uncharacterized protein.	JmjC domain-containing protein.	0.750
CORC01_00184	CORC01_02467	A0A1G4BS85	A0A1G4BLL3	Uncharacterized protein.	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.972
CORC01_00184	CORC01_02723	A0A1G4BS85	A0A1G4BKI4	Uncharacterized protein.	PLU-1-like protein.	0.915
CORC01_00184	CORC01_03222	A0A1G4BS85	A0A1G4BJH5	Uncharacterized protein.	Peptidase family M20/M25/M40 protein.	0.841
CORC01_00184	CORC01_04085	A0A1G4BS85	A0A1G4BGR0	Uncharacterized protein.	Histone H3-like centromeric protein cse-4.	0.946
CORC01_00184	CORC01_04086	A0A1G4BS85	A0A1G4BGV0	Uncharacterized protein.	FUN14 family protein.	0.811
CORC01_00184	CORC01_04627	A0A1G4BS85	A0A1G4BF32	Uncharacterized protein.	Histone H2A; Belongs to the histone H2A family.	0.967
CORC01_00184	CORC01_05161	A0A1G4BS85	A0A1G4BDX4	Uncharacterized protein.	BAH domain-containing protein.	0.571
CORC01_00184	CORC01_05473	A0A1G4BS85	A0A1G4BCZ4	Uncharacterized protein.	Tat pathway signal sequence.	0.811
CORC01_00184	CORC01_06193	A0A1G4BS85	A0A1G4BB97	Uncharacterized protein.	Histone H2B; Belongs to the histone H2B family.	0.994
CORC01_00184	CORC01_07232	A0A1G4BS85	A0A1G4B7M3	Uncharacterized protein.	SET domain-containing protein.	0.847
CORC01_00184	CORC01_09599	A0A1G4BS85	A0A1G4B175	Uncharacterized protein.	Zn(2)-C6 fungal-type domain-containing protein.	0.811
CORC01_00184	CORC01_09634	A0A1G4BS85	A0A1G4B108	Uncharacterized protein.	Linker histone H1 and H5 family protein.	0.878
CORC01_00184	CORC01_10106	A0A1G4BS85	A0A1G4AZH3	Uncharacterized protein.	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.972
CORC01_00184	CORC01_12324	A0A1G4BS85	A0A1G4ATB2	Uncharacterized protein.	Snf5/smarcb1/ini1.	0.736
CORC01_00184	CORC01_12403	A0A1G4BS85	A0A1G4AT17	Uncharacterized protein.	Histone H3; Belongs to the histone H3 family.	0.946
CORC01_00184	CORC01_13708	A0A1G4BS85	A0A1G4APF5	Uncharacterized protein.	WD domain-containing protein.	0.811
CORC01_02368	CORC01_00184	A0A1G4BM20	A0A1G4BS85	JmjC domain-containing protein.	Uncharacterized protein.	0.750
CORC01_02368	CORC01_02467	A0A1G4BM20	A0A1G4BLL3	JmjC domain-containing protein.	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.948
CORC01_02368	CORC01_02723	A0A1G4BM20	A0A1G4BKI4	JmjC domain-containing protein.	PLU-1-like protein.	0.810