STRINGSTRING
CORC01_12403 CORC01_12403 CORC01_12324 CORC01_12324 CORC01_10106 CORC01_10106 CORC01_09634 CORC01_09634 CORC01_06194 CORC01_06194 CORC01_06193 CORC01_06193 CORC01_04627 CORC01_04627 CORC01_04085 CORC01_04085 CORC01_04086 CORC01_04086 CORC01_02467 CORC01_02467 CORC01_02368 CORC01_02368 CORC01_00184 CORC01_00184
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CORC01_12403Histone H3; Belongs to the histone H3 family. (136 aa)
CORC01_12324Snf5/smarcb1/ini1. (580 aa)
CORC01_10106Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
CORC01_09634Linker histone H1 and H5 family protein. (247 aa)
CORC01_06194Histone H2A; Belongs to the histone H2A family. (134 aa)
CORC01_06193Histone H2B; Belongs to the histone H2B family. (137 aa)
CORC01_04627Histone H2A; Belongs to the histone H2A family. (141 aa)
CORC01_04085Histone H3-like centromeric protein cse-4. (134 aa)
CORC01_04086FUN14 family protein. (150 aa)
CORC01_02467Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (131 aa)
CORC01_02368JmjC domain-containing protein. (1757 aa)
CORC01_00184Uncharacterized protein. (89 aa)
Your Current Organism:
Colletotrichum orchidophilum
NCBI taxonomy Id: 1209926
Other names: C. orchidophilum, CBS 632.80, Colletotrichum orchidophilum Damm, P.F. Cannon & Crous, 2012, Colletotrichum sp. UD-2012n
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