STRINGSTRING
CORC01_05129 CORC01_05129 CORC01_00140 CORC01_00140 CORC01_00217 CORC01_00217 CORC01_12841 CORC01_12841 CORC01_09163 CORC01_09163 CORC01_08553 CORC01_08553 CORC01_07001 CORC01_07001 CORC01_06881 CORC01_06881 CORC01_06700 CORC01_06700 CORC01_05298 CORC01_05298 CORC01_02781 CORC01_02781 CORC01_02489 CORC01_02489 CORC01_01961 CORC01_01961 CORC01_04539 CORC01_04539 CORC01_03981 CORC01_03981
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CORC01_05129Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. (603 aa)
CORC01_00140Protoheme IX farnesyltransferase, mitochondrial; Converts protoheme IX and farnesyl diphosphate to heme O. Belongs to the ubiA prenyltransferase family. (519 aa)
CORC01_00217Uroporphyrinogen-III synthase. (310 aa)
CORC01_12841Siroheme synthase. (264 aa)
CORC01_09163Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. (383 aa)
CORC01_08553Coproporphyrinogen III oxidase. (413 aa)
CORC01_07001Haloacid dehalogenase-like hydrolase. (241 aa)
CORC01_06881Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family. (439 aa)
CORC01_06700Cytochrome oxidase assembly protein. (487 aa)
CORC01_05298Uroporphyrin-III. (558 aa)
CORC01_027812Fe-2S iron-sulfur cluster binding domain-containing protein. (188 aa)
CORC01_02489Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. (433 aa)
CORC01_01961Porphobilinogen deaminase. (363 aa)
CORC01_045395-aminolevulinate synthase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. (631 aa)
CORC01_03981Frataxin. (210 aa)
Your Current Organism:
Colletotrichum orchidophilum
NCBI taxonomy Id: 1209926
Other names: C. orchidophilum, CBS 632.80, Colletotrichum orchidophilum Damm, P.F. Cannon & Crous, 2012, Colletotrichum sp. UD-2012n
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