STRINGSTRING
CORC01_02371 CORC01_02371 CORC01_04509 CORC01_04509 CORC01_09432 CORC01_09432 CORC01_09249 CORC01_09249 CORC01_06788 CORC01_06788 CORC01_06642 CORC01_06642 CORC01_04698 CORC01_04698 CORC01_04579 CORC01_04579 CORC01_00271 CORC01_00271 CORC01_00183 CORC01_00183
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CORC01_02371Ubiquitin-activating enzyme E1-like; Belongs to the ubiquitin-activating E1 family. (697 aa)
CORC01_04509MIZ/SP-RING zinc finger. (555 aa)
CORC01_09432MIZ/SP-RING zinc finger. (1323 aa)
CORC01_09249RING-type domain-containing protein. (459 aa)
CORC01_06788SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
CORC01_06642SP-RING-type domain-containing protein. (452 aa)
CORC01_04698WLM domain-containing protein. (346 aa)
CORC01_04579ThiF family protein. (515 aa)
CORC01_00271RING-type domain-containing protein. (391 aa)
CORC01_00183Ubiquitin family protein. (100 aa)
Your Current Organism:
Colletotrichum orchidophilum
NCBI taxonomy Id: 1209926
Other names: C. orchidophilum, CBS 632.80, Colletotrichum orchidophilum Damm, P.F. Cannon & Crous, 2012, Colletotrichum sp. UD-2012n
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