9 items (Colletotrichum orchidophilum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CORC01_10762	MOSC domain-containing protein. (461 aa)
	CORC01_12240	Aminotransferase class-V. (934 aa)
	CORC01_08857	MOSC domain-containing protein. (488 aa)
	CORC01_06276	MOSC domain-containing protein. (413 aa)
	CORC01_05850	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. (904 aa)
	CORC01_03938	Uncharacterized protein. (771 aa)
	hxB	Molybdenum cofactor sulfurase; Sulfurates the molybdenum cofactor. Sulfation of molybdenum is essential for xanthine dehydrogenase (XDH) and aldehyde oxidase (ADO) enzymes in which molybdenum cofactor is liganded by 1 oxygen and 1 sulfur atom in active form. (823 aa)
	CORC01_02427	MOSC domain-containing protein. (378 aa)
	CORC01_00119	Oxidoreductase molybdopterin binding domain-containing protein. (651 aa)

Your Current Organism:

Colletotrichum orchidophilum

NCBI taxonomy Id: 1209926
Other names: C. orchidophilum, CBS 632.80, Colletotrichum orchidophilum Damm, P.F. Cannon & Crous, 2012, Colletotrichum sp. UD-2012n

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CORC01_00119	CORC01_03938	A0A1G4BTE2	A0A1G4BHJ4	Oxidoreductase molybdopterin binding domain-containing protein.	Uncharacterized protein.	0.560
CORC01_00119	CORC01_05850	A0A1G4BTE2	A0A1G4BBG9	Oxidoreductase molybdopterin binding domain-containing protein.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.939
CORC01_00119	CORC01_12240	A0A1G4BTE2	A0A1G4ATE7	Oxidoreductase molybdopterin binding domain-containing protein.	Aminotransferase class-V.	0.560
CORC01_00119	hxB	A0A1G4BTE2	A0A1G4BIK4	Oxidoreductase molybdopterin binding domain-containing protein.	Molybdenum cofactor sulfurase; Sulfurates the molybdenum cofactor. Sulfation of molybdenum is essential for xanthine dehydrogenase (XDH) and aldehyde oxidase (ADO) enzymes in which molybdenum cofactor is liganded by 1 oxygen and 1 sulfur atom in active form.	0.560
CORC01_02427	CORC01_05850	A0A1G4BLH7	A0A1G4BBG9	MOSC domain-containing protein.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.852
CORC01_03938	CORC01_00119	A0A1G4BHJ4	A0A1G4BTE2	Uncharacterized protein.	Oxidoreductase molybdopterin binding domain-containing protein.	0.560
CORC01_03938	CORC01_05850	A0A1G4BHJ4	A0A1G4BBG9	Uncharacterized protein.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.555
CORC01_05850	CORC01_00119	A0A1G4BBG9	A0A1G4BTE2	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	Oxidoreductase molybdopterin binding domain-containing protein.	0.939
CORC01_05850	CORC01_02427	A0A1G4BBG9	A0A1G4BLH7	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	MOSC domain-containing protein.	0.852
CORC01_05850	CORC01_03938	A0A1G4BBG9	A0A1G4BHJ4	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	Uncharacterized protein.	0.555
CORC01_05850	CORC01_06276	A0A1G4BBG9	A0A1G4BAX2	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	MOSC domain-containing protein.	0.852
CORC01_05850	CORC01_08857	A0A1G4BBG9	A0A1G4B370	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	MOSC domain-containing protein.	0.852
CORC01_05850	CORC01_10762	A0A1G4BBG9	A0A1G4AXY2	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	MOSC domain-containing protein.	0.852
CORC01_05850	CORC01_12240	A0A1G4BBG9	A0A1G4ATE7	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	Aminotransferase class-V.	0.614
CORC01_05850	hxB	A0A1G4BBG9	A0A1G4BIK4	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	Molybdenum cofactor sulfurase; Sulfurates the molybdenum cofactor. Sulfation of molybdenum is essential for xanthine dehydrogenase (XDH) and aldehyde oxidase (ADO) enzymes in which molybdenum cofactor is liganded by 1 oxygen and 1 sulfur atom in active form.	0.614
CORC01_06276	CORC01_05850	A0A1G4BAX2	A0A1G4BBG9	MOSC domain-containing protein.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.852
CORC01_08857	CORC01_05850	A0A1G4B370	A0A1G4BBG9	MOSC domain-containing protein.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.852
CORC01_10762	CORC01_05850	A0A1G4AXY2	A0A1G4BBG9	MOSC domain-containing protein.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.852
CORC01_12240	CORC01_00119	A0A1G4ATE7	A0A1G4BTE2	Aminotransferase class-V.	Oxidoreductase molybdopterin binding domain-containing protein.	0.560
CORC01_12240	CORC01_05850	A0A1G4ATE7	A0A1G4BBG9	Aminotransferase class-V.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.614