69 items (Colletotrichum orchidophilum) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CORC01_02467	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (131 aa)
	CORC01_02447	Histone-like transcription factor and archaeal histone. (190 aa)
	CORC01_02829	TAFII28 domain-containing protein. (322 aa)
	CORC01_02720	TATA box binding protein associated factor. (461 aa)
	CORC01_03379	Uncharacterized protein. (1026 aa)
	CORC01_03299	Bromodomain associated domain-containing protein. (344 aa)
	CORC01_03508	Transcription initiation factor TFIID subunit A. (844 aa)
	CORC01_03681	Helix-loop-helix DNA-binding domain-containing protein. (536 aa)
	CORC01_03622	DNA polymerase epsilon subunit D. (329 aa)
	CORC01_04092	Histone-like transcription factor and archaeal histone. (283 aa)
	CORC01_04086	FUN14 family protein. (150 aa)
	CORC01_04017	Uncharacterized protein. (99 aa)
	CORC01_04085	Histone H3-like centromeric protein cse-4. (134 aa)
	CORC01_04466	Helix-loop-helix DNA-binding domain-containing protein. (498 aa)
	CORC01_04300	XPGI domain-containing protein. (831 aa)
	CORC01_04521	Helix-loop-helix DNA-binding domain-containing protein. (725 aa)
	CORC01_05385	Helix-loop-helix DNA-binding domain-containing protein. (338 aa)
	CORC01_05338	BHLH domain-containing protein. (330 aa)
	CORC01_05473	Tat pathway signal sequence. (517 aa)
	CORC01_05466	RNA polymerase Rpb3/RpoA insert domain-containing protein. (360 aa)
	CORC01_05465	GrpE protein; Belongs to the GrpE family. (235 aa)
	CORC01_05655	RNA polymerase Rpb3/RpoA insert domain-containing protein. (372 aa)
	CORC01_06193	Histone H2B; Belongs to the histone H2B family. (137 aa)
	URM1	Ubiquitin-related modifier 1; Acts as a sulfur carrier required for 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Serves as sulfur donor in tRNA 2-thiolation reaction by being thiocarboxylated (-COSH) at its C-terminus by the MOCS3 homolog UBA4. The sulfur is then transferred to tRNA to form 2-thiolation of mcm(5)S(2)U. Prior mcm(5) tRNA modification by the elongator complex is required for 2-thiolation. Also acts as a ubiquitin-like protein (UBL) that is covalently conjugated via an isopeptide bond to lysine residues of target pr [...] (112 aa)
	CORC01_13478	Helix-loop-helix DNA-binding domain-containing protein. (681 aa)
	CORC01_13179	Uncharacterized protein. (124 aa)
	CORC01_13096	Uncharacterized protein. (723 aa)
	CORC01_13078	Transcription initiation factor IID. (176 aa)
	CORC01_12893	Helix-loop-helix DNA-binding domain-containing protein. (445 aa)
	CORC01_12403	Histone H3; Belongs to the histone H3 family. (136 aa)
	CORC01_11195	Uncharacterized protein. (560 aa)
	CORC01_11203	Helix-loop-helix DNA-binding domain-containing protein. (119 aa)
	CORC01_11214	Transcription initiation factor TFIID subunit 9. (309 aa)
	CORC01_04627	Histone H2A; Belongs to the histone H2A family. (141 aa)
	CORC01_14142	ESCRT-II complex subunit. (220 aa)
	CORC01_14208	SRF-type transcription factor. (222 aa)
	CORC01_14117	Uncharacterized protein. (246 aa)
	CORC01_13709	PAS domain-containing protein. (658 aa)
	CORC01_11078	Uncharacterized protein. (871 aa)
	CORC01_11126	Helix-loop-helix DNA-binding domain-containing protein. (485 aa)
	CORC01_11000	MADS-box MEF2 type transcription factor. (659 aa)
	CORC01_10450	Helix-loop-helix DNA-binding domain-containing protein. (982 aa)
	CORC01_10371	Spt3. (771 aa)
	CORC01_10106	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
	CORC01_10049	Uncharacterized protein. (719 aa)
	CORC01_10139	Histone-like transcription factor and archaeal histone. (341 aa)
	CORC01_09999	Uncharacterized protein. (313 aa)
	CORC01_09904	3-hydroxyacyl-CoA dehydrogenase. (332 aa)
	CORC01_09599	Zn(2)-C6 fungal-type domain-containing protein. (762 aa)
	CORC01_09029	Cleavage and polyadenylation specificity factor subunit 5. (272 aa)
	CORC01_08836	CENP-T_C domain-containing protein. (535 aa)
	CORC01_08632	RNA_pol_L_2 domain-containing protein. (140 aa)
	CORC01_08559	Uncharacterized protein. (301 aa)
	CORC01_07772	Histone-like transcription factor and archaeal histone. (202 aa)
	CORC01_07718	Dpy-30 domain-containing protein. (153 aa)
	CORC01_07581	Uncharacterized protein. (159 aa)
	CORC01_07624	Myb-like DNA-binding domain-containing protein. (932 aa)
	CORC01_07439	Uncharacterized protein. (953 aa)
	CORC01_07098	BHLH family transcription factor. (517 aa)
	CORC01_06429	Zn(2)-C6 fungal-type domain-containing protein. (656 aa)
	CORC01_06194	Histone H2A; Belongs to the histone H2A family. (134 aa)
	CORC01_00291	Bromo domain-containing protein. (1144 aa)
	CORC01_01117	TATA-binding protein-associated phosphoprotein. (138 aa)
	CORC01_01169	BRCA1 C Terminus domain-containing protein. (389 aa)
	CORC01_01355	Aspartate-semialdehyde dehydrogenase. (361 aa)
	CORC01_01922	Uncharacterized protein. (111 aa)
	CORC01_01994	Helix-loop-helix DNA-binding domain-containing protein. (322 aa)
	CORC01_02394	CBFD_NFYB_HMF domain-containing protein. (78 aa)
	CORC01_02395	Uncharacterized protein. (451 aa)

Your Current Organism:

Colletotrichum orchidophilum

NCBI taxonomy Id: 1209926
Other names: C. orchidophilum, CBS 632.80, Colletotrichum orchidophilum Damm, P.F. Cannon & Crous, 2012, Colletotrichum sp. UD-2012n

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CORC01_00291	CORC01_02467	A0A1G4BSQ2	A0A1G4BLL3	Bromo domain-containing protein.	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.766
CORC01_00291	CORC01_02720	A0A1G4BSQ2	A0A1G4BK76	Bromo domain-containing protein.	TATA box binding protein associated factor.	0.996
CORC01_00291	CORC01_03508	A0A1G4BSQ2	A0A1G4BIS5	Bromo domain-containing protein.	Transcription initiation factor TFIID subunit A.	0.996
CORC01_00291	CORC01_04017	A0A1G4BSQ2	A0A1G4BGS6	Bromo domain-containing protein.	Uncharacterized protein.	0.645
CORC01_00291	CORC01_04085	A0A1G4BSQ2	A0A1G4BGR0	Bromo domain-containing protein.	Histone H3-like centromeric protein cse-4.	0.645
CORC01_00291	CORC01_04086	A0A1G4BSQ2	A0A1G4BGV0	Bromo domain-containing protein.	FUN14 family protein.	0.645
CORC01_00291	CORC01_04627	A0A1G4BSQ2	A0A1G4BF32	Bromo domain-containing protein.	Histone H2A; Belongs to the histone H2A family.	0.716
CORC01_00291	CORC01_05466	A0A1G4BSQ2	A0A1G4BCW6	Bromo domain-containing protein.	RNA polymerase Rpb3/RpoA insert domain-containing protein.	0.476
CORC01_00291	CORC01_05473	A0A1G4BSQ2	A0A1G4BCZ4	Bromo domain-containing protein.	Tat pathway signal sequence.	0.645
CORC01_00291	CORC01_05655	A0A1G4BSQ2	A0A1G4BC92	Bromo domain-containing protein.	RNA polymerase Rpb3/RpoA insert domain-containing protein.	0.503
CORC01_00291	CORC01_06193	A0A1G4BSQ2	A0A1G4BB97	Bromo domain-containing protein.	Histone H2B; Belongs to the histone H2B family.	0.720
CORC01_00291	CORC01_06194	A0A1G4BSQ2	A0A1G4BAZ9	Bromo domain-containing protein.	Histone H2A; Belongs to the histone H2A family.	0.589
CORC01_00291	CORC01_09599	A0A1G4BSQ2	A0A1G4B175	Bromo domain-containing protein.	Zn(2)-C6 fungal-type domain-containing protein.	0.645
CORC01_00291	CORC01_09999	A0A1G4BSQ2	A0A1G4AZT9	Bromo domain-containing protein.	Uncharacterized protein.	0.403
CORC01_00291	CORC01_10106	A0A1G4BSQ2	A0A1G4AZH3	Bromo domain-containing protein.	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.766
CORC01_00291	CORC01_10371	A0A1G4BSQ2	A0A1G4AYU2	Bromo domain-containing protein.	Spt3.	0.994
CORC01_00291	CORC01_11214	A0A1G4BSQ2	A0A1G4AWI5	Bromo domain-containing protein.	Transcription initiation factor TFIID subunit 9.	0.996
CORC01_00291	CORC01_12403	A0A1G4BSQ2	A0A1G4AT17	Bromo domain-containing protein.	Histone H3; Belongs to the histone H3 family.	0.645
CORC01_01117	CORC01_03622	A0A1G4BQ24	A0A1G4BI54	TATA-binding protein-associated phosphoprotein.	DNA polymerase epsilon subunit D.	0.924
CORC01_01117	CORC01_04092	A0A1G4BQ24	A0A1G4BGW8	TATA-binding protein-associated phosphoprotein.	Histone-like transcription factor and archaeal histone.	0.400