55 items (Colletotrichum orchidophilum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CORC01_05585	Protein kinase domain-containing protein. (785 aa)
	CORC01_05662	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (194 aa)
	CORC01_12142	Methyltransferase. (282 aa)
	CORC01_12923	SAP domain-containing protein. (262 aa)
	CORC01_13451	Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (613 aa)
	CORC01_13724	WD domain-containing protein. (333 aa)
	CORC01_14061	DnaJ domain-containing protein. (447 aa)
	CORC01_13945	Guanylate kinase. (871 aa)
	CORC01_14341	TAP domain-containing protein. (658 aa)
	CORC01_05899	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (659 aa)
	CORC01_05975	Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family. (1035 aa)
	CORC01_06153	Importin N-terminal domain-containing protein. (1098 aa)
	CORC01_06190	DnaJ domain-containing protein. (545 aa)
	CORC01_06168	Zinc finger protein. (121 aa)
	CORC01_06717	Uncharacterized protein. (542 aa)
	CORC01_06977	GANP/Nin1/mts3/eIF-3 p25 family protein. (1388 aa)
	CORC01_06978	Low temperature viability protein. (421 aa)
	CORC01_06979	CP-type G domain-containing protein. (654 aa)
	CORC01_07134	WD domain-containing protein. (358 aa)
	CORC01_07787	Tho complex subunit 7. (352 aa)
	CORC01_09292	Uncharacterized protein. (801 aa)
	CORC01_09256	GLE1-like protein. (537 aa)
	CORC01_09368	E3 ubiquitin-protein ligase. (826 aa)
	CORC01_09941	THO complex subunit 2. (2436 aa)
	CORC01_10102	Nuclear pore complex protein An-Nup82. (894 aa)
	CORC01_10242	RanBP1 domain-containing protein. (235 aa)
	CORC01_10197	DSS1/SEM1 family protein. (99 aa)
	CORC01_10243	Uncharacterized protein. (860 aa)
	CORC01_10368	PCI domain-containing protein. (544 aa)
	CORC01_03628	CP-type G domain-containing protein. (541 aa)
	CORC01_03612	ABC transporter. (607 aa)
	CORC01_03670	RNA polymerase Rpb4. (144 aa)
	CORC01_02309	Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. (744 aa)
	CORC01_02128	Uncharacterized protein. (107 aa)
	CORC01_10631	Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (455 aa)
	CORC01_10953	PCI domain-containing protein. (459 aa)
	CORC01_11326	TFIIS N-terminal domain-containing protein. (422 aa)
	CORC01_11457	40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (213 aa)
	CORC01_04339	ATPase. (781 aa)
	CORC01_11662	Uncharacterized protein. (218 aa)
	CORC01_04340	Importin N-terminal domain-containing protein. (1079 aa)
	CORC01_02022	40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (260 aa)
	CORC01_01864	Cse1. (959 aa)
	CORC01_01336	ABC transporter. (1101 aa)
	CORC01_00878	ABC transporter. (612 aa)
	CORC01_00573	Uncharacterized protein. (227 aa)
	CORC01_00176	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (216 aa)
	CORC01_00230	Importin N-terminal domain-containing protein. (1279 aa)
	CORC01_00253	FHA domain-containing protein. (342 aa)
	CORC01_00207	RNP domain-containing protein. (441 aa)
	CORC01_00245	U3 small nucleolar RNA-associated protein 22. (1091 aa)
	TIF6	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. (246 aa)
	CORC01_04630	R3H domain-containing protein. (597 aa)
	CORC01_05506	RNA recognition domain-containing protein. (219 aa)
	CORC01_05505	RNA recognition domain-containing protein. (197 aa)

Your Current Organism:

Colletotrichum orchidophilum

NCBI taxonomy Id: 1209926
Other names: C. orchidophilum, CBS 632.80, Colletotrichum orchidophilum Damm, P.F. Cannon & Crous, 2012, Colletotrichum sp. UD-2012n

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CORC01_00176	CORC01_00230	A0A1G4BSC0	A0A1G4BSM1	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	Importin N-terminal domain-containing protein.	0.997
CORC01_00176	CORC01_01864	A0A1G4BSC0	A0A1G4BN99	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	Cse1.	0.938
CORC01_00176	CORC01_02022	A0A1G4BSC0	A0A1G4BMU4	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.	0.691
CORC01_00176	CORC01_03670	A0A1G4BSC0	A0A1G4BIJ0	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	RNA polymerase Rpb4.	0.653
CORC01_00176	CORC01_04340	A0A1G4BSC0	A0A1G4BG50	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	Importin N-terminal domain-containing protein.	0.998
CORC01_00176	CORC01_05585	A0A1G4BSC0	A0A1G4BCP2	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	Protein kinase domain-containing protein.	0.471
CORC01_00176	CORC01_05975	A0A1G4BSC0	A0A1G4BBE8	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.	0.997
CORC01_00176	CORC01_06153	A0A1G4BSC0	A0A1G4BB61	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	Importin N-terminal domain-containing protein.	0.946
CORC01_00176	CORC01_07134	A0A1G4BSC0	A0A1G4B7U4	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	WD domain-containing protein.	0.744
CORC01_00176	CORC01_09292	A0A1G4BSC0	A0A1G4B1X6	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	Uncharacterized protein.	0.951
CORC01_00176	CORC01_10242	A0A1G4BSC0	A0A1G4AZB4	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	RanBP1 domain-containing protein.	0.986
CORC01_00176	CORC01_10243	A0A1G4BSC0	A0A1G4AZ50	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	Uncharacterized protein.	0.986
CORC01_00176	CORC01_11457	A0A1G4BSC0	A0A1G4AVZ8	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.	0.641
CORC01_00176	CORC01_14341	A0A1G4BSC0	A0A1G4AML0	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	TAP domain-containing protein.	0.514
CORC01_00176	TIF6	A0A1G4BSC0	A0A1G4BFL2	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family.	0.413
CORC01_00207	CORC01_03670	A0A1G4BSP1	A0A1G4BIJ0	RNP domain-containing protein.	RNA polymerase Rpb4.	0.585
CORC01_00207	CORC01_04630	A0A1G4BSP1	A0A1G4BF40	RNP domain-containing protein.	R3H domain-containing protein.	0.476
CORC01_00207	CORC01_05505	A0A1G4BSP1	A0A1G4BCV0	RNP domain-containing protein.	RNA recognition domain-containing protein.	0.700
CORC01_00207	CORC01_05506	A0A1G4BSP1	A0A1G4BD10	RNP domain-containing protein.	RNA recognition domain-containing protein.	0.700
CORC01_00207	CORC01_07134	A0A1G4BSP1	A0A1G4B7U4	RNP domain-containing protein.	WD domain-containing protein.	0.428