STRINGSTRING
CORC01_02395 CORC01_02395 CORC01_12040 CORC01_12040 CORC01_12403 CORC01_12403 CORC01_13980 CORC01_13980 CORC01_06193 CORC01_06193 CORC01_14244 CORC01_14244 CORC01_04627 CORC01_04627 CORC01_04085 CORC01_04085 CORC01_04017 CORC01_04017 CORC01_02466 CORC01_02466 CORC01_02458 CORC01_02458 CORC01_06194 CORC01_06194 CORC01_09599 CORC01_09599 CORC01_10107 CORC01_10107 CORC01_10106 CORC01_10106 CORC01_05473 CORC01_05473 CORC01_11527 CORC01_11527 CORC01_01798 CORC01_01798 CORC01_02394 CORC01_02394 CORC01_02467 CORC01_02467
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CORC01_02395Uncharacterized protein. (451 aa)
CORC01_12040Sentrin-specific protease. (1413 aa)
CORC01_12403Histone H3; Belongs to the histone H3 family. (136 aa)
CORC01_13980GRF zinc finger. (439 aa)
CORC01_06193Histone H2B; Belongs to the histone H2B family. (137 aa)
CORC01_14244Haloacid dehalogenase. (279 aa)
CORC01_04627Histone H2A; Belongs to the histone H2A family. (141 aa)
CORC01_04085Histone H3-like centromeric protein cse-4. (134 aa)
CORC01_04017Uncharacterized protein. (99 aa)
CORC01_02466Uncharacterized protein. (381 aa)
CORC01_02458SNF2 family domain-containing protein. (1156 aa)
CORC01_06194Histone H2A; Belongs to the histone H2A family. (134 aa)
CORC01_09599Zn(2)-C6 fungal-type domain-containing protein. (762 aa)
CORC01_10107Tetratricopeptide. (828 aa)
CORC01_10106Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
CORC01_05473Tat pathway signal sequence. (517 aa)
CORC01_11527AT hook domain-containing protein. (162 aa)
CORC01_01798Uncharacterized protein. (780 aa)
CORC01_02394CBFD_NFYB_HMF domain-containing protein. (78 aa)
CORC01_02467Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (131 aa)
Your Current Organism:
Colletotrichum orchidophilum
NCBI taxonomy Id: 1209926
Other names: C. orchidophilum, CBS 632.80, Colletotrichum orchidophilum Damm, P.F. Cannon & Crous, 2012, Colletotrichum sp. UD-2012n
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