5 items (Colletotrichum orchidophilum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CORC01_03268	Uncharacterized protein. (126 aa)
	CORC01_11709	Carbamoyl-phosphate synthase subunit L. (722 aa)
	CORC01_09119	Uncharacterized protein. (1375 aa)
	CORC01_07428	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (1104 aa)
	CORC01_03651	Uncharacterized protein. (1178 aa)

Your Current Organism:

Colletotrichum orchidophilum

NCBI taxonomy Id: 1209926
Other names: C. orchidophilum, CBS 632.80, Colletotrichum orchidophilum Damm, P.F. Cannon & Crous, 2012, Colletotrichum sp. UD-2012n

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CORC01_03651	CORC01_07428	A0A1G4BI53	A0A1G4B701	Uncharacterized protein.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.923
CORC01_03651	CORC01_09119	A0A1G4BI53	A0A1G4B271	Uncharacterized protein.	Uncharacterized protein.	0.988
CORC01_07428	CORC01_03651	A0A1G4B701	A0A1G4BI53	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	Uncharacterized protein.	0.923
CORC01_07428	CORC01_09119	A0A1G4B701	A0A1G4B271	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	Uncharacterized protein.	0.409
CORC01_09119	CORC01_03651	A0A1G4B271	A0A1G4BI53	Uncharacterized protein.	Uncharacterized protein.	0.988
CORC01_09119	CORC01_07428	A0A1G4B271	A0A1G4B701	Uncharacterized protein.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.409