24 items (Colletotrichum orchidophilum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CORC01_14100	Uncharacterized protein. (1669 aa)
	CORC01_00102	WD repeat domain-containing protein jip5. (422 aa)
	CORC01_00185	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (890 aa)
	CORC01_02603	C3H1-type domain-containing protein. (647 aa)
	CORC01_03651	Uncharacterized protein. (1178 aa)
	CORC01_05133	Uncharacterized protein. (1568 aa)
	CORC01_05250	Nucleoporin nup44. (355 aa)
	CORC01_05506	RNA recognition domain-containing protein. (219 aa)
	CORC01_05505	RNA recognition domain-containing protein. (197 aa)
	CORC01_05783	RNA binding protein. (312 aa)
	CORC01_06436	TPR/MLP1/MLP2-like protein. (2128 aa)
	CORC01_07016	Nucleoporin protein Ndc1-Nup. (679 aa)
	CORC01_07134	WD domain-containing protein. (358 aa)
	CORC01_07843	Non-repetitive/WGA-negative nucleoporin. (1399 aa)
	CORC01_08563	Uncharacterized protein. (1125 aa)
	CORC01_08617	Nup188_C domain-containing protein. (1821 aa)
	CORC01_09119	Uncharacterized protein. (1375 aa)
	CORC01_10102	Nuclear pore complex protein An-Nup82. (894 aa)
	CORC01_10242	RanBP1 domain-containing protein. (235 aa)
	CORC01_10243	Uncharacterized protein. (860 aa)
	CORC01_11221	Nucleoporin autopeptidase. (1958 aa)
	CORC01_13711	RanBD1 domain-containing protein. (485 aa)
	CORC01_13951	Uncharacterized protein. (327 aa)
	CORC01_14341	TAP domain-containing protein. (658 aa)

Your Current Organism:

Colletotrichum orchidophilum

NCBI taxonomy Id: 1209926
Other names: C. orchidophilum, CBS 632.80, Colletotrichum orchidophilum Damm, P.F. Cannon & Crous, 2012, Colletotrichum sp. UD-2012n

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CORC01_00185	CORC01_02603	A0A1G4BSJ2	A0A1G4BKT8	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	C3H1-type domain-containing protein.	0.839
CORC01_00185	CORC01_03651	A0A1G4BSJ2	A0A1G4BI53	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	Uncharacterized protein.	0.985
CORC01_00185	CORC01_05133	A0A1G4BSJ2	A0A1G4BE08	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	Uncharacterized protein.	0.997
CORC01_00185	CORC01_05250	A0A1G4BSJ2	A0A1G4BDJ8	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	Nucleoporin nup44.	0.994
CORC01_00185	CORC01_05505	A0A1G4BSJ2	A0A1G4BCV0	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	RNA recognition domain-containing protein.	0.626
CORC01_00185	CORC01_05506	A0A1G4BSJ2	A0A1G4BD10	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	RNA recognition domain-containing protein.	0.626
CORC01_00185	CORC01_05783	A0A1G4BSJ2	A0A1G4BBZ1	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	RNA binding protein.	0.626
CORC01_00185	CORC01_06436	A0A1G4BSJ2	A0A1G4BA02	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	TPR/MLP1/MLP2-like protein.	0.984
CORC01_00185	CORC01_07016	A0A1G4BSJ2	A0A1G4B854	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	Nucleoporin protein Ndc1-Nup.	0.546
CORC01_00185	CORC01_07134	A0A1G4BSJ2	A0A1G4B7U4	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	WD domain-containing protein.	0.962
CORC01_00185	CORC01_07843	A0A1G4BSJ2	A0A1G4B6C9	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	Non-repetitive/WGA-negative nucleoporin.	0.995
CORC01_00185	CORC01_08563	A0A1G4BSJ2	A0A1G4B4A5	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	Uncharacterized protein.	0.998
CORC01_00185	CORC01_08617	A0A1G4BSJ2	A0A1G4B3T4	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	Nup188_C domain-containing protein.	0.935
CORC01_00185	CORC01_09119	A0A1G4BSJ2	A0A1G4B271	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	Uncharacterized protein.	0.999
CORC01_00185	CORC01_10242	A0A1G4BSJ2	A0A1G4AZB4	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	RanBP1 domain-containing protein.	0.929
CORC01_00185	CORC01_10243	A0A1G4BSJ2	A0A1G4AZ50	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	Uncharacterized protein.	0.929
CORC01_00185	CORC01_11221	A0A1G4BSJ2	A0A1G4AWG3	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	Nucleoporin autopeptidase.	0.999
CORC01_00185	CORC01_13711	A0A1G4BSJ2	A0A1G4APA2	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	RanBD1 domain-containing protein.	0.927
CORC01_00185	CORC01_14100	A0A1G4BSJ2	A0A1G4AN49	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	Uncharacterized protein.	0.997
CORC01_00185	CORC01_14341	A0A1G4BSJ2	A0A1G4AML0	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	TAP domain-containing protein.	0.990