STRINGSTRING
CORC01_00183 CORC01_00183 CORC01_13547 CORC01_13547 CORC01_12399 CORC01_12399 CORC01_12400 CORC01_12400 CORC01_10828 CORC01_10828 CORC01_10562 CORC01_10562 CORC01_08441 CORC01_08441 CORC01_08418 CORC01_08418 CORC01_06788 CORC01_06788 CORC01_06625 CORC01_06625 CORC01_04579 CORC01_04579 CORC01_04596 CORC01_04596 CORC01_04275 CORC01_04275 CORC01_03983 CORC01_03983 CORC01_02371 CORC01_02371 CORC01_02064 CORC01_02064
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CORC01_00183Ubiquitin family protein. (100 aa)
CORC01_13547Uncharacterized protein. (243 aa)
CORC01_12399HTH CENPB-type domain-containing protein. (139 aa)
CORC01_12400Transposase. (98 aa)
CORC01_10828Uncharacterized protein. (245 aa)
CORC01_10562DUF1115 domain-containing protein. (315 aa)
CORC01_08441Uncharacterized protein. (637 aa)
CORC01_08418Centromere binding protein B. (197 aa)
CORC01_06788SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
CORC01_06625Uncharacterized protein. (185 aa)
CORC01_04579ThiF family protein. (515 aa)
CORC01_04596Uncharacterized protein. (269 aa)
CORC01_04275Centromere binding protein B. (417 aa)
CORC01_03983Uncharacterized protein. (134 aa)
CORC01_02371Ubiquitin-activating enzyme E1-like; Belongs to the ubiquitin-activating E1 family. (697 aa)
CORC01_02064Centromere binding protein B. (582 aa)
Your Current Organism:
Colletotrichum orchidophilum
NCBI taxonomy Id: 1209926
Other names: C. orchidophilum, CBS 632.80, Colletotrichum orchidophilum Damm, P.F. Cannon & Crous, 2012, Colletotrichum sp. UD-2012n
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