39 items (Colletotrichum orchidophilum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CORC01_03890	Mago nashi. (211 aa)
	CORC01_03651	Uncharacterized protein. (1178 aa)
	CORC01_02603	C3H1-type domain-containing protein. (647 aa)
	CORC01_00185	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (890 aa)
	CORC01_00102	WD repeat domain-containing protein jip5. (422 aa)
	CORC01_00178	PWI domain-containing protein. (253 aa)
	CORC01_14341	TAP domain-containing protein. (658 aa)
	CORC01_14100	Uncharacterized protein. (1669 aa)
	CORC01_13945	Guanylate kinase. (871 aa)
	CORC01_13951	Uncharacterized protein. (327 aa)
	CORC01_13724	WD domain-containing protein. (333 aa)
	CORC01_13711	RanBD1 domain-containing protein. (485 aa)
	CORC01_13604	Helicase associated domain-containing protein. (976 aa)
	CORC01_12780	Fip1 domain-containing protein. (350 aa)
	CORC01_12676	RNA recognition domain-containing protein. (181 aa)
	CORC01_11732	RRM domain-containing protein. (173 aa)
	CORC01_11662	Uncharacterized protein. (218 aa)
	CORC01_11221	Nucleoporin autopeptidase. (1958 aa)
	CORC01_10243	Uncharacterized protein. (860 aa)
	CORC01_10242	RanBP1 domain-containing protein. (235 aa)
	CORC01_10102	Nuclear pore complex protein An-Nup82. (894 aa)
	CORC01_09256	GLE1-like protein. (537 aa)
	CORC01_09119	Uncharacterized protein. (1375 aa)
	CORC01_08818	Pre-mRNA-splicing factor SLU7. (460 aa)
	CORC01_08617	Nup188_C domain-containing protein. (1821 aa)
	CORC01_08563	Uncharacterized protein. (1125 aa)
	CORC01_07843	Non-repetitive/WGA-negative nucleoporin. (1399 aa)
	CORC01_07720	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (550 aa)
	CORC01_07787	Tho complex subunit 7. (352 aa)
	CORC01_07134	WD domain-containing protein. (358 aa)
	CORC01_07016	Nucleoporin protein Ndc1-Nup. (679 aa)
	CORC01_06436	TPR/MLP1/MLP2-like protein. (2128 aa)
	CORC01_05783	RNA binding protein. (312 aa)
	CORC01_05772	Uncharacterized protein. (209 aa)
	CORC01_05505	RNA recognition domain-containing protein. (197 aa)
	CORC01_05506	RNA recognition domain-containing protein. (219 aa)
	CORC01_05250	Nucleoporin nup44. (355 aa)
	CORC01_05133	Uncharacterized protein. (1568 aa)
	CORC01_04753	WD repeat domain-containing protein. (583 aa)

Your Current Organism:

Colletotrichum orchidophilum

NCBI taxonomy Id: 1209926
Other names: C. orchidophilum, CBS 632.80, Colletotrichum orchidophilum Damm, P.F. Cannon & Crous, 2012, Colletotrichum sp. UD-2012n

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CORC01_00178	CORC01_02603	A0A1G4BSL9	A0A1G4BKT8	PWI domain-containing protein.	C3H1-type domain-containing protein.	0.640
CORC01_00178	CORC01_03890	A0A1G4BSL9	A0A1G4BHK8	PWI domain-containing protein.	Mago nashi.	0.916
CORC01_00178	CORC01_04753	A0A1G4BSL9	A0A1G4BEX7	PWI domain-containing protein.	WD repeat domain-containing protein.	0.991
CORC01_00178	CORC01_05133	A0A1G4BSL9	A0A1G4BE08	PWI domain-containing protein.	Uncharacterized protein.	0.754
CORC01_00178	CORC01_05505	A0A1G4BSL9	A0A1G4BCV0	PWI domain-containing protein.	RNA recognition domain-containing protein.	0.827
CORC01_00178	CORC01_05506	A0A1G4BSL9	A0A1G4BD10	PWI domain-containing protein.	RNA recognition domain-containing protein.	0.827
CORC01_00178	CORC01_05772	A0A1G4BSL9	A0A1G4BBZ6	PWI domain-containing protein.	Uncharacterized protein.	0.768
CORC01_00178	CORC01_05783	A0A1G4BSL9	A0A1G4BBZ1	PWI domain-containing protein.	RNA binding protein.	0.827
CORC01_00178	CORC01_06436	A0A1G4BSL9	A0A1G4BA02	PWI domain-containing protein.	TPR/MLP1/MLP2-like protein.	0.750
CORC01_00178	CORC01_07134	A0A1G4BSL9	A0A1G4B7U4	PWI domain-containing protein.	WD domain-containing protein.	0.823
CORC01_00178	CORC01_07720	A0A1G4BSL9	A0A1G4B6M2	PWI domain-containing protein.	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	0.863
CORC01_00178	CORC01_07843	A0A1G4BSL9	A0A1G4B6C9	PWI domain-containing protein.	Non-repetitive/WGA-negative nucleoporin.	0.817
CORC01_00178	CORC01_08818	A0A1G4BSL9	A0A1G4B344	PWI domain-containing protein.	Pre-mRNA-splicing factor SLU7.	0.982
CORC01_00178	CORC01_09119	A0A1G4BSL9	A0A1G4B271	PWI domain-containing protein.	Uncharacterized protein.	0.810
CORC01_00178	CORC01_10242	A0A1G4BSL9	A0A1G4AZB4	PWI domain-containing protein.	RanBP1 domain-containing protein.	0.505
CORC01_00178	CORC01_10243	A0A1G4BSL9	A0A1G4AZ50	PWI domain-containing protein.	Uncharacterized protein.	0.505
CORC01_00178	CORC01_11732	A0A1G4BSL9	A0A1G4AV13	PWI domain-containing protein.	RRM domain-containing protein.	0.992
CORC01_00178	CORC01_12676	A0A1G4BSL9	A0A1G4AS99	PWI domain-containing protein.	RNA recognition domain-containing protein.	0.889
CORC01_00178	CORC01_13604	A0A1G4BSL9	A0A1G4APR7	PWI domain-containing protein.	Helicase associated domain-containing protein.	0.954
CORC01_00178	CORC01_13711	A0A1G4BSL9	A0A1G4APA2	PWI domain-containing protein.	RanBD1 domain-containing protein.	0.505