STRINGSTRING
CORC01_05088 CORC01_05088 CORC01_12755 CORC01_12755 CORC01_06788 CORC01_06788 CORC01_00183 CORC01_00183
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CORC01_05088Ran GTPase activating protein 1. (420 aa)
CORC01_12755Uncharacterized protein. (730 aa)
CORC01_06788SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
CORC01_00183Ubiquitin family protein. (100 aa)
Your Current Organism:
Colletotrichum orchidophilum
NCBI taxonomy Id: 1209926
Other names: C. orchidophilum, CBS 632.80, Colletotrichum orchidophilum Damm, P.F. Cannon & Crous, 2012, Colletotrichum sp. UD-2012n
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