STRINGSTRING
hndD-2 hndD-2 mamA mamA glmE glmE AEE90364.1 AEE90364.1 AEE90494.1 AEE90494.1 AEE90497.1 AEE90497.1 AEE90503.1 AEE90503.1 AEE90513.1 AEE90513.1 AEE90565.1 AEE90565.1 AEE90577.1 AEE90577.1 cooF cooF AEE90760.1 AEE90760.1 aspA aspA AEE91514.1 AEE91514.1 AEE91612.1 AEE91612.1 AEE91736.1 AEE91736.1 hndD hndD AEE92024.1 AEE92024.1 AEE92338.1 AEE92338.1 AEE92395.1 AEE92395.1 ybhJ ybhJ
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
hndD-2Hydrogenase, Fe-only; SMART: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; Iron hydrogenase, small subunit-like; TIGRFAM: Iron hydrogenase, subset; KEGG: hor:Hore_01810 NADH dehydrogenase I subunit G; PFAM: Iron hydrogenase, large subunit, C-terminal; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; Ferredoxin; 4Fe-4S binding domain; Iron hydrogenase, small subunit-like. (659 aa)
mamAMethylaspartate mutase S chain; Catalyzes the carbon skeleton rearrangement of L-glutamate to L-threo-3-methylaspartate ((2S,3S)-3-methylaspartate). (140 aa)
glmEMethylaspartate mutase, E subunit; Catalyzes the carbon skeleton rearrangement of L-glutamate to L-threo-3-methylaspartate ((2S,3S)-3-methylaspartate). (484 aa)
AEE90364.1Aconitate hydratase; TIGRFAM: Aconitase, putative; KEGG: csc:Csac_0750 aconitate hydratase; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; Aconitase A/isopropylmalate dehydratase small subunit, swivel. (645 aa)
AEE90494.1Cobalamin B12-binding domain protein; PFAM: Cobalamin (vitamin B12)-binding; Methionine synthase, cobalamin (vitamin B12)-binding module, cap; KEGG: afu:AF0011 corrinoid methyltransferase protein (MtaC-2). (210 aa)
AEE90497.1Cobalamin B12-binding domain protein; PFAM: Cobalamin (vitamin B12)-binding; Methionine synthase, cobalamin (vitamin B12)-binding module, cap; KEGG: toc:Toce_0790 cobalamin B12-binding domain protein. (212 aa)
AEE90503.1Cobalamin B12-binding domain protein; PFAM: Cobalamin (vitamin B12)-binding; Methionine synthase, cobalamin (vitamin B12)-binding module, cap; KEGG: afu:AF0011 corrinoid methyltransferase protein (MtaC-2). (210 aa)
AEE90513.1Cobalamin B12-binding domain protein; PFAM: Cobalamin (vitamin B12)-binding; Methionine synthase, cobalamin (vitamin B12)-binding module, cap; KEGG: toc:Toce_0793 cobalamin B12-binding domain protein. (228 aa)
AEE90565.1Cobalamin B12-binding domain protein; PFAM: Cobalamin (vitamin B12)-binding; KEGG: toc:Toce_0232 cobalamin B12-binding domain protein. (549 aa)
AEE90577.1KEGG: toc:Toce_0246 CoA-substrate-specific enzyme activase; TIGRFAM: CoA enzyme activase; PFAM: ATPase, BadF/BadG/BcrA/BcrD type. (320 aa)
cooFPFAM: 4Fe-4S binding domain; KEGG: toc:Toce_0799 iron-sulfur cluster-binding protein CooF. (139 aa)
AEE90760.1PFAM: FAD dependent oxidoreductase; BFD-like [2Fe-2S]-binding domain; KEGG: tit:Thit_1800 FAD dependent oxidoreductase. (490 aa)
aspAHAMAP: Fumarate hydratase, class II; KEGG: bha:BH1426 aspartate ammonia-lyase; PFAM: Lyase 1, N-terminal; Fumarase C, C-terminal. (466 aa)
AEE91514.1KEGG: toc:Toce_1258 CoA-substrate-specific enzyme activase; TIGRFAM: CoA enzyme activase; PFAM: ATPase, BadF/BadG/BcrA/BcrD type. (321 aa)
AEE91612.1PFAM: Protein of unknown function DUF116; KEGG: toc:Toce_1028 protein of unknown function DUF116. (264 aa)
AEE91736.1KEGG: ssm:Spirs_2834 hypothetical protein. (105 aa)
hndDTIGRFAM: Iron hydrogenase, subset; PFAM: Iron hydrogenase, large subunit, C-terminal; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; Ferredoxin; 4Fe-4S binding domain; Iron hydrogenase, small subunit-like; KEGG: toc:Toce_0697 NAD(P)-dependent iron-only hydrogenase catalytic subunit; SMART: Iron hydrogenase, small subunit-like; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding. (584 aa)
AEE92024.1PFAM: Putative Fe-S cluster; 4Fe-4S binding domain; KEGG: dae:Dtox_0178 4Fe-4S ferredoxin iron-sulfur binding domain protein. (443 aa)
AEE92338.1PFAM: FAD dependent oxidoreductase; BFD-like [2Fe-2S]-binding domain; KEGG: elm:ELI_2864 hypothetical protein. (481 aa)
AEE92395.1KEGG: efe:EFER_3665 aconitate hydratase; TIGRFAM: Aconitase, putative; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; Aconitase A/isopropylmalate dehydratase small subunit, swivel. (649 aa)
ybhJ3-isopropylmalate dehydratase; KEGG: amt:Amet_3214 hypothetical protein; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; Aconitase A/isopropylmalate dehydratase small subunit, swivel. (766 aa)
Your Current Organism:
Tepidanaerobacter acetatoxydans
NCBI taxonomy Id: 1209989
Other names: T. acetatoxydans Re1, Tepidanaerobacter acetatoxydans Re1, Tepidanaerobacter acetatoxydans str. Re1, Tepidanaerobacter acetatoxydans strain Re1, Tepidanaerobacter sp. Re1
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