STRINGSTRING
murB murB GCA_000295735_00111 GCA_000295735_00111 kdsB kdsB lpxK lpxK ABW45_06420 ABW45_06420 GCA_000295735_00208 GCA_000295735_00208 mrdB mrdB mraZ mraZ rsmH rsmH ftsL ftsL GCA_000295735_00438 GCA_000295735_00438 lpxH lpxH mpl mpl ABW45_10745 ABW45_10745 ABW45_13485 ABW45_13485 GCA_000295735_00956 GCA_000295735_00956 GCA_000295735_01123 GCA_000295735_01123 ABW45_01740 ABW45_01740 ABW45_01745 ABW45_01745 ABW45_01750 ABW45_01750 surA surA lptD lptD GCA_000295735_01334 GCA_000295735_01334 ABW45_18290 ABW45_18290 ABW45_16405 ABW45_16405 ABW45_16400 ABW45_16400 ABW45_20895 ABW45_20895 lptA lptA GCA_000295735_01424 GCA_000295735_01424 ABW45_20880 ABW45_20880 ABW45_19235 ABW45_19235 ABW44_14700 ABW44_14700 murA murA GCA_000295735_01429 GCA_000295735_01429 GCA_000295735_01452 GCA_000295735_01452 bamD bamD ABW45_07755 ABW45_07755 GCA_000295735_01531 GCA_000295735_01531 ABW45_09555 ABW45_09555 bamE bamE GCA_000295735_01611 GCA_000295735_01611 lptE lptE GCA_000295735_01916 GCA_000295735_01916 GCA_000295735_01941 GCA_000295735_01941 ABW45_16560 ABW45_16560 ABW45_06795 ABW45_06795 rlmN rlmN GCA_000295735_02063 GCA_000295735_02063 GCA_000295735_02064 GCA_000295735_02064 GCA_000295735_02065 GCA_000295735_02065 bamB bamB ftsB ftsB mreB mreB GCA_000295735_02163 GCA_000295735_02163 mraY mraY ftsW ftsW murG murG murC murC ddl ddl ftsQ ftsQ ftsA ftsA ftsZ ftsZ lpxC lpxC ABW45_09070 ABW45_09070 ABW45_09825 ABW45_09825 lpxL lpxL bamA bamA lpxD lpxD lpxA lpxA lpxB lpxB GCA_000295735_02536 GCA_000295735_02536 ftsE ftsE ABW45_15525 ABW45_15525 ABW45_15530 ABW45_15530 GCA_000295735_03071 GCA_000295735_03071 ABW45_04075 ABW45_04075 ABW45_04070 ABW45_04070
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
murBUnannotated protein; Cell wall formation. (345 aa)
GCA_000295735_00111Unannotated protein. (281 aa)
kdsBUnannotated protein; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria. (257 aa)
lpxKUnannotated protein; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA). (174 aa)
ABW45_06420Unannotated protein. (305 aa)
GCA_000295735_00208Unannotated protein. (309 aa)
mrdBUnannotated protein; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily. (198 aa)
mraZUnannotated protein; Belongs to the MraZ family. (148 aa)
rsmHUnannotated protein; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. (328 aa)
ftsLUnannotated protein; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. (87 aa)
GCA_000295735_00438Unannotated protein. (504 aa)
lpxHUnannotated protein; Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. (257 aa)
mplUnannotated protein; Reutilizes the intact tripeptide L-alanyl-gamma-D-glutamyl- meso-diaminopimelate by linking it to UDP-N-acetylmuramate. Belongs to the MurCDEF family. Mpl subfamily. (441 aa)
ABW45_10745Unannotated protein. (193 aa)
ABW45_13485Unannotated protein. (806 aa)
GCA_000295735_00956Unannotated protein. (172 aa)
GCA_000295735_01123Unannotated protein. (465 aa)
ABW45_01740Unannotated protein. (604 aa)
ABW45_01745Unannotated protein. (1280 aa)
ABW45_01750Unannotated protein; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides. (715 aa)
surAUnannotated protein; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation. (448 aa)
lptDUnannotated protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. (816 aa)
GCA_000295735_01334Unannotated protein. (202 aa)
ABW45_18290Unannotated protein; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). (816 aa)
ABW45_16405Unannotated protein. (368 aa)
ABW45_16400Unannotated protein. (359 aa)
ABW45_20895Unannotated protein. (239 aa)
lptAUnannotated protein; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm. (173 aa)
GCA_000295735_01424Unannotated protein. (186 aa)
ABW45_20880Unannotated protein; Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8- phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family. (182 aa)
ABW45_19235Unannotated protein. (333 aa)
ABW44_14700Unannotated protein; Belongs to the BolA/IbaG family. (76 aa)
murAUnannotated protein; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. (424 aa)
GCA_000295735_01429Unannotated protein. (102 aa)
GCA_000295735_01452Unannotated protein. (277 aa)
bamDUnannotated protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (294 aa)
ABW45_07755Unannotated protein. (450 aa)
GCA_000295735_01531Unannotated protein. (447 aa)
ABW45_09555Unannotated protein. (487 aa)
bamEUnannotated protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (131 aa)
GCA_000295735_01611Unannotated protein. (474 aa)
lptEUnannotated protein; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane. (198 aa)
GCA_000295735_01916Unannotated protein. (109 aa)
GCA_000295735_01941Unannotated protein. (242 aa)
ABW45_16560Unannotated protein. (346 aa)
ABW45_06795Unannotated protein. (220 aa)
rlmNUnannotated protein; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family. (402 aa)
GCA_000295735_02063Unannotated protein. (265 aa)
GCA_000295735_02064Unannotated protein. (284 aa)
GCA_000295735_02065Unannotated protein. (212 aa)
bamBUnannotated protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (402 aa)
ftsBUnannotated protein; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. (116 aa)
mreBUnannotated protein. (348 aa)
GCA_000295735_02163Unannotated protein. (204 aa)
mraYUnannotated protein; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. (361 aa)
ftsWUnannotated protein; Peptidoglycan polymerase that is essential for cell division. Belongs to the SEDS family. FtsW subfamily. (436 aa)
murGUnannotated protein; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. (363 aa)
murCUnannotated protein; Cell wall formation; Belongs to the MurCDEF family. (478 aa)
ddlUnannotated protein; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. (321 aa)
ftsQUnannotated protein; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly. (250 aa)
ftsAUnannotated protein; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. (411 aa)
ftsZUnannotated protein; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. (409 aa)
lpxCUnannotated protein; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family. (303 aa)
ABW45_09070Unannotated protein. (316 aa)
ABW45_09825Unannotated protein; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. (432 aa)
lpxLUnannotated protein; Catalyzes the transfer of laurate from lauroyl-acyl carrier protein (ACP) to Kdo(2)-lipid IV(A) to form Kdo(2)-(lauroyl)-lipid IV(A). (306 aa)
bamAUnannotated protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (807 aa)
lpxDUnannotated protein; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily. (340 aa)
lpxAUnannotated protein; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. (263 aa)
lpxBUnannotated protein; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. (647 aa)
GCA_000295735_02536Unannotated protein. (918 aa)
ftsEUnannotated protein; Part of the ABC transporter FtsEX involved in cellular division. (228 aa)
ABW45_15525Unannotated protein; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. (316 aa)
ABW45_15530Unannotated protein. (280 aa)
GCA_000295735_03071Unannotated protein. (291 aa)
ABW45_04075Unannotated protein; Belongs to the peptidase S41A family. (464 aa)
ABW45_04070Unannotated protein. (457 aa)
Your Current Organism:
Stenotrophomonas maltophilia S028
NCBI taxonomy Id: 1210005
Other names: S. maltophilia S028, Stenotrophomonas maltophilia str. S028, Stenotrophomonas maltophilia strain S028
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