STRINGSTRING
B277_10304 B277_10304 B277_12786 B277_12786 B277_14488 B277_14488 B277_14513 B277_14513 B277_14648 B277_14648 B277_14948 B277_14948 B277_15013 B277_15013 B277_15018 B277_15018 B277_15189 B277_15189 B277_06053 B277_06053 mshB mshB B277_00265 B277_00265 B277_01139 B277_01139 B277_01644 B277_01644 B277_04170 B277_04170 B277_04227 B277_04227 B277_04232 B277_04232 B277_05099 B277_05099 B277_05953 B277_05953 B277_16104 B277_16104 B277_06849 B277_06849 B277_07805 B277_07805 xerC-2 xerC-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
B277_103043-hydroxyisobutyryl-CoA hydrolase; COG1024 Enoyl-CoA hydratase/carnithine racemase. (343 aa)
B277_12786COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (398 aa)
B277_14488COG1250 3-hydroxyacyl-CoA dehydrogenase. (286 aa)
B277_14513COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (398 aa)
B277_14648Twin-arginine translocation pathway signal; COG3485 Protocatechuate 3,4-dioxygenase beta subunit. (325 aa)
B277_14948COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family. (245 aa)
B277_15013NAD-binding protein 3-hydroxyacyl-CoA dehydrogenase; COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family. (724 aa)
B277_15018COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (406 aa)
B277_15189COG0183 Acetyl-CoA acetyltransferase. (110 aa)
B277_06053Carboxymuconolactone decarboxylase family protein. (178 aa)
mshB1D-myo-inosityl-2-acetamido-2-deoxy-alpha-D- glucopyranoside deacetylase; COG2120 Uncharacterized proteins, LmbE homologs; Belongs to the MshB deacetylase family. (302 aa)
B277_00265COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily). (193 aa)
B277_01139COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (429 aa)
B277_01644COG2120 Uncharacterized proteins, LmbE homologs. (280 aa)
B277_04170Peroxidase. (65 aa)
B277_04227COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (378 aa)
B277_042323-hydroxyacyl-CoA dehydrogenase; COG1024 Enoyl-CoA hydratase/carnithine racemase. (690 aa)
B277_05099Short chain dehydrogenase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases). (256 aa)
B277_05953COG1024 Enoyl-CoA hydratase/carnithine racemase. (240 aa)
B277_16104COG1250 3-hydroxyacyl-CoA dehydrogenase. (402 aa)
B277_06849COG2120 Uncharacterized proteins, LmbE homologs. (267 aa)
B277_07805COG2186 Transcriptional regulators. (236 aa)
xerC-2Tyrosine recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. (314 aa)
Your Current Organism:
Janibacter hoylei
NCBI taxonomy Id: 1210046
Other names: J. hoylei PVAS-1, Janibacter hoylei DSM 21601, Janibacter hoylei MTCC 8307, Janibacter hoylei PVAS-1, Janibacter hoylei str. PVAS-1, Janibacter hoylei strain PVAS-1, Janibacter sp. PVAS-1
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