(18 nodes) Growth factor receptor binding network (Pediculus humanus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	E0W393_PEDHC	IRS-type PTB domain-containing protein. (356 aa)
	E0W2V4_PEDHC	EGF-like domain-containing protein. (273 aa)
	E0W1J3_PEDHC	DBB domain-containing protein. (866 aa)
	E0W1C7_PEDHC	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (173 aa)
	E0VYT1_PEDHC	Protein kinase domain-containing protein. (744 aa)
	E0VYA6_PEDHC	Uncharacterized protein. (145 aa)
	E0VWV5_PEDHC	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (421 aa)
	E0VST4_PEDHC	Protein E, putative. (211 aa)
	E0VSE1_PEDHC	Uncharacterized protein. (202 aa)
	E0VS04_PEDHC	Uncharacterized protein. (103 aa)
	E0VR31_PEDHC	Sorting nexin-4, putative. (421 aa)
	E0VQV3_PEDHC	Shc transforming protein, putative. (419 aa)
	E0VPY0_PEDHC	Ncstrn_small domain-containing protein. (642 aa)
	E0VP50_PEDHC	PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family. (325 aa)
	E0VA02_PEDHC	Phosducin domain-containing protein. (237 aa)
	E0VBE8_PEDHC	Uncharacterized protein. (359 aa)
	E0VGX3_PEDHC	Serine-threonine protein kinase, plant-type, putative; Belongs to the protein kinase superfamily. (485 aa)
	E0VJF3_PEDHC	Ras GTPase-activating protein, putative. (874 aa)

Your Current Organism:

Pediculus humanus

NCBI taxonomy Id: 121224
Other names: P. humanus corporis, Pediculus humanus corporis, Pediculus humanus humanus, human body lice, human body louse

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
E0VBE8_PEDHC	E0VQV3_PEDHC	E0VBE8	E0VQV3	Uncharacterized protein.	Shc transforming protein, putative.	0.616
E0VBE8_PEDHC	E0VST4_PEDHC	E0VBE8	E0VST4	Uncharacterized protein.	Protein E, putative.	0.504
E0VGX3_PEDHC	E0VYT1_PEDHC	E0VGX3	E0VYT1	Serine-threonine protein kinase, plant-type, putative; Belongs to the protein kinase superfamily.	Protein kinase domain-containing protein.	0.923
E0VQV3_PEDHC	E0VBE8_PEDHC	E0VQV3	E0VBE8	Shc transforming protein, putative.	Uncharacterized protein.	0.616
E0VQV3_PEDHC	E0VST4_PEDHC	E0VQV3	E0VST4	Shc transforming protein, putative.	Protein E, putative.	0.982
E0VQV3_PEDHC	E0VYA6_PEDHC	E0VQV3	E0VYA6	Shc transforming protein, putative.	Uncharacterized protein.	0.409
E0VST4_PEDHC	E0VBE8_PEDHC	E0VST4	E0VBE8	Protein E, putative.	Uncharacterized protein.	0.504
E0VST4_PEDHC	E0VQV3_PEDHC	E0VST4	E0VQV3	Protein E, putative.	Shc transforming protein, putative.	0.982
E0VST4_PEDHC	E0VWV5_PEDHC	E0VST4	E0VWV5	Protein E, putative.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.494
E0VST4_PEDHC	E0VYA6_PEDHC	E0VST4	E0VYA6	Protein E, putative.	Uncharacterized protein.	0.604
E0VST4_PEDHC	E0W1C7_PEDHC	E0VST4	E0W1C7	Protein E, putative.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.494
E0VST4_PEDHC	E0W393_PEDHC	E0VST4	E0W393	Protein E, putative.	IRS-type PTB domain-containing protein.	0.926
E0VWV5_PEDHC	E0VST4_PEDHC	E0VWV5	E0VST4	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Protein E, putative.	0.494
E0VWV5_PEDHC	E0VYA6_PEDHC	E0VWV5	E0VYA6	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Uncharacterized protein.	0.575
E0VWV5_PEDHC	E0W1J3_PEDHC	E0VWV5	E0W1J3	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	DBB domain-containing protein.	0.446
E0VWV5_PEDHC	E0W393_PEDHC	E0VWV5	E0W393	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	IRS-type PTB domain-containing protein.	0.401
E0VYA6_PEDHC	E0VQV3_PEDHC	E0VYA6	E0VQV3	Uncharacterized protein.	Shc transforming protein, putative.	0.409
E0VYA6_PEDHC	E0VST4_PEDHC	E0VYA6	E0VST4	Uncharacterized protein.	Protein E, putative.	0.604
E0VYA6_PEDHC	E0VWV5_PEDHC	E0VYA6	E0VWV5	Uncharacterized protein.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.575
E0VYA6_PEDHC	E0W1C7_PEDHC	E0VYA6	E0W1C7	Uncharacterized protein.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.575