(34 nodes) Extrinsic component of plasma membrane network (Pediculus humanus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	E0VQ87_PEDHC	Guanine nucleotide-binding protein beta, putative. (107 aa)
	E0VQ40_PEDHC	Guanine nucleotide-binding protein subunit beta, putative. (354 aa)
	E0VPV8_PEDHC	Ras GTP exchange factor, son of sevenless, putative. (1507 aa)
	E0VJ02_PEDHC	Armadillo repeat protein, putative. (675 aa)
	E0VJW3_PEDHC	Dedicator of cytokinesis protein, putative; Belongs to the DOCK family. (1880 aa)
	E0VK06_PEDHC	Uncharacterized protein. (76 aa)
	E0VK07_PEDHC	Uncharacterized protein. (133 aa)
	E0VKE5_PEDHC	Uncharacterized protein. (1516 aa)
	E0VKI4_PEDHC	BTB domain-containing protein. (351 aa)
	E0VMT0_PEDHC	Guanine nucleotide-binding protein gamma-1subunit precursor, putative. (104 aa)
	E0VMV9_PEDHC	Uncharacterized protein. (304 aa)
	E0VNA4_PEDHC	Adapter molecule Crk, putative. (263 aa)
	E0VNL7_PEDHC	Dock-4, putative. (157 aa)
	E0VTS4_PEDHC	Guanine nucleotide-binding protein G(I)/G(S)/G(T), subunit beta, putative. (353 aa)
	E0VRF8_PEDHC	Guanine nucleotide-binding protein subunit beta, putative. (347 aa)
	E0VQX4_PEDHC	PHB domain-containing protein. (263 aa)
	E0VQK9_PEDHC	Guanine nucleotide-binding protein G(O) subunit alpha, putative. (356 aa)
	E0W4G0_PEDHC	Phosphatidylinositol-binding clathrin assembly protein, putative. (210 aa)
	E0V907_PEDHC	Uncharacterized protein. (824 aa)
	E0W032_PEDHC	Peptidylprolyl isomerase. (424 aa)
	E0VZT3_PEDHC	Tyrosine-protein kinase. (1347 aa)
	E0VZ62_PEDHC	Guanine nucleotide-binding protein G alpha subunit, putative. (355 aa)
	E0VYY5_PEDHC	Guanine nucleotide-binding protein G, subunit beta, putative. (344 aa)
	E0VY18_PEDHC	Cadherin-23 precursor, putative. (996 aa)
	E0VAY2_PEDHC	Guanine nucleotide-binding protein subunit beta 1, putative. (317 aa)
	E0VBU6_PEDHC	Lachesin precursor, putative. (369 aa)
	E0VF59_PEDHC	Huntingtin-associated protein-interacting protein, putative. (2251 aa)
	E0VFI4_PEDHC	Guanine nucleotide-binding protein G(Q), subunit alpha, putative. (217 aa)
	E0VY16_PEDHC	Predicted protein; Cadherins are calcium-dependent cell adhesion proteins. (1764 aa)
	E0VWX2_PEDHC	Phosphatidylinositol-binding clathrin assembly protein LAP, putative. (533 aa)
	E0VV40_PEDHC	Cadherin-23 precursor, putative; Cadherins are calcium-dependent cell adhesion proteins. (1478 aa)
	E0VTY5_PEDHC	Limbic system-associated membrane proteinprecursor, putative. (500 aa)
	E0VIQ5_PEDHC	Phosphoinositide phospholipase C. (913 aa)
	E0VIQ6_PEDHC	Uncharacterized protein. (57 aa)

Your Current Organism:

Pediculus humanus

NCBI taxonomy Id: 121224
Other names: P. humanus corporis, Pediculus humanus corporis, Pediculus humanus humanus, human body lice, human body louse

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
E0VAY2_PEDHC	E0VFI4_PEDHC	E0VAY2	E0VFI4	Guanine nucleotide-binding protein subunit beta 1, putative.	Guanine nucleotide-binding protein G(Q), subunit alpha, putative.	0.829
E0VAY2_PEDHC	E0VMT0_PEDHC	E0VAY2	E0VMT0	Guanine nucleotide-binding protein subunit beta 1, putative.	Guanine nucleotide-binding protein gamma-1subunit precursor, putative.	0.496
E0VAY2_PEDHC	E0VQK9_PEDHC	E0VAY2	E0VQK9	Guanine nucleotide-binding protein subunit beta 1, putative.	Guanine nucleotide-binding protein G(O) subunit alpha, putative.	0.681
E0VAY2_PEDHC	E0VZ62_PEDHC	E0VAY2	E0VZ62	Guanine nucleotide-binding protein subunit beta 1, putative.	Guanine nucleotide-binding protein G alpha subunit, putative.	0.681
E0VF59_PEDHC	E0VFI4_PEDHC	E0VF59	E0VFI4	Huntingtin-associated protein-interacting protein, putative.	Guanine nucleotide-binding protein G(Q), subunit alpha, putative.	0.988
E0VF59_PEDHC	E0VIQ5_PEDHC	E0VF59	E0VIQ5	Huntingtin-associated protein-interacting protein, putative.	Phosphoinositide phospholipase C.	0.589
E0VF59_PEDHC	E0VIQ6_PEDHC	E0VF59	E0VIQ6	Huntingtin-associated protein-interacting protein, putative.	Uncharacterized protein.	0.589
E0VF59_PEDHC	E0VZT3_PEDHC	E0VF59	E0VZT3	Huntingtin-associated protein-interacting protein, putative.	Tyrosine-protein kinase.	0.686
E0VFI4_PEDHC	E0VAY2_PEDHC	E0VFI4	E0VAY2	Guanine nucleotide-binding protein G(Q), subunit alpha, putative.	Guanine nucleotide-binding protein subunit beta 1, putative.	0.829
E0VFI4_PEDHC	E0VF59_PEDHC	E0VFI4	E0VF59	Guanine nucleotide-binding protein G(Q), subunit alpha, putative.	Huntingtin-associated protein-interacting protein, putative.	0.988
E0VFI4_PEDHC	E0VIQ5_PEDHC	E0VFI4	E0VIQ5	Guanine nucleotide-binding protein G(Q), subunit alpha, putative.	Phosphoinositide phospholipase C.	0.955
E0VFI4_PEDHC	E0VIQ6_PEDHC	E0VFI4	E0VIQ6	Guanine nucleotide-binding protein G(Q), subunit alpha, putative.	Uncharacterized protein.	0.547
E0VFI4_PEDHC	E0VQ40_PEDHC	E0VFI4	E0VQ40	Guanine nucleotide-binding protein G(Q), subunit alpha, putative.	Guanine nucleotide-binding protein subunit beta, putative.	0.829
E0VFI4_PEDHC	E0VQ87_PEDHC	E0VFI4	E0VQ87	Guanine nucleotide-binding protein G(Q), subunit alpha, putative.	Guanine nucleotide-binding protein beta, putative.	0.774
E0VFI4_PEDHC	E0VRF8_PEDHC	E0VFI4	E0VRF8	Guanine nucleotide-binding protein G(Q), subunit alpha, putative.	Guanine nucleotide-binding protein subunit beta, putative.	0.976
E0VFI4_PEDHC	E0VTS4_PEDHC	E0VFI4	E0VTS4	Guanine nucleotide-binding protein G(Q), subunit alpha, putative.	Guanine nucleotide-binding protein G(I)/G(S)/G(T), subunit beta, putative.	0.829
E0VFI4_PEDHC	E0VYY5_PEDHC	E0VFI4	E0VYY5	Guanine nucleotide-binding protein G(Q), subunit alpha, putative.	Guanine nucleotide-binding protein G, subunit beta, putative.	0.829
E0VIQ5_PEDHC	E0VF59_PEDHC	E0VIQ5	E0VF59	Phosphoinositide phospholipase C.	Huntingtin-associated protein-interacting protein, putative.	0.589
E0VIQ5_PEDHC	E0VFI4_PEDHC	E0VIQ5	E0VFI4	Phosphoinositide phospholipase C.	Guanine nucleotide-binding protein G(Q), subunit alpha, putative.	0.955
E0VIQ5_PEDHC	E0VQ40_PEDHC	E0VIQ5	E0VQ40	Phosphoinositide phospholipase C.	Guanine nucleotide-binding protein subunit beta, putative.	0.493