(13 nodes) Bacterial extracellular solute-binding protein, and ABC-type maltose transporter activity network (Pseudarthrobacter sulfonivorans)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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Others

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protein homology

Your Input:
	ALV39771.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (404 aa)
	ALV43669.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (280 aa)
	ALV39772.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (262 aa)
	ALV40853.1	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (360 aa)
	ALV41363.1	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (434 aa)
	ALV41364.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (302 aa)
	ALV41365.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (304 aa)
	ALV41908.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (301 aa)
	ALV41909.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (293 aa)
	ALV41910.1	Sugar-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (444 aa)
	ALV42546.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (433 aa)
	ALV42547.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (312 aa)
	ALV42548.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (294 aa)

Your Current Organism:

Pseudarthrobacter sulfonivorans

NCBI taxonomy Id: 121292
Other names: ATCC BAA-112, Arthrobacter sp. ALL, Arthrobacter sulfonivorans, Arthrobacter sulfonivorans Borodina et al. 2002, DSM 14002, JCM 13520, P. sulfonivorans, Pseudarthrobacter sulfonivorans (Borodina et al. 2002) Busse 2016, strain ALL

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALV39771.1	ALV39772.1	AU252_00155	AU252_00165	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.959
ALV39771.1	ALV40853.1	AU252_00155	AU252_06475	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.918
ALV39771.1	ALV41364.1	AU252_00155	AU252_09550	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.904
ALV39771.1	ALV41365.1	AU252_00155	AU252_09555	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.903
ALV39771.1	ALV41908.1	AU252_00155	AU252_12665	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.882
ALV39771.1	ALV41909.1	AU252_00155	AU252_12670	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.903
ALV39771.1	ALV41910.1	AU252_00155	AU252_12675	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.637
ALV39771.1	ALV42547.1	AU252_00155	AU252_16495	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.912
ALV39771.1	ALV42548.1	AU252_00155	AU252_16500	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.898
ALV39771.1	ALV43669.1	AU252_00155	AU252_00160	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.968
ALV39772.1	ALV39771.1	AU252_00165	AU252_00155	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.959
ALV39772.1	ALV40853.1	AU252_00165	AU252_06475	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.984
ALV39772.1	ALV41363.1	AU252_00165	AU252_09545	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.882
ALV39772.1	ALV41364.1	AU252_00165	AU252_09550	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.970
ALV39772.1	ALV41909.1	AU252_00165	AU252_12670	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.972
ALV39772.1	ALV41910.1	AU252_00165	AU252_12675	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.882
ALV39772.1	ALV42546.1	AU252_00165	AU252_16490	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.882
ALV39772.1	ALV42547.1	AU252_00165	AU252_16495	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.972
ALV39772.1	ALV43669.1	AU252_00165	AU252_00160	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.993
ALV40853.1	ALV39771.1	AU252_06475	AU252_00155	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.918

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