(5 nodes) Bacterial extracellular solute-binding protein, and ABC-type maltose transporter activity network (Pseudarthrobacter sulfonivorans)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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textmining

co-expression

protein homology

Your Input:
	ALV42242.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (427 aa)
	ALV42243.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (322 aa)
	ALV42244.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (305 aa)
	ALV42245.1	Poxvirus protein I5; Derived by automated computational analysis using gene prediction method: Protein Homology. (214 aa)
	ALV43984.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (413 aa)

Your Current Organism:

Pseudarthrobacter sulfonivorans

NCBI taxonomy Id: 121292
Other names: ATCC BAA-112, Arthrobacter sp. ALL, Arthrobacter sulfonivorans, Arthrobacter sulfonivorans Borodina et al. 2002, DSM 14002, JCM 13520, P. sulfonivorans, Pseudarthrobacter sulfonivorans (Borodina et al. 2002) Busse 2016, strain ALL

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALV42242.1	ALV42243.1	AU252_14720	AU252_14725	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.950
ALV42242.1	ALV42244.1	AU252_14720	AU252_14730	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.945
ALV42242.1	ALV42245.1	AU252_14720	AU252_14735	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Poxvirus protein I5; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.666
ALV42242.1	ALV43984.1	AU252_14720	AU252_14745	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.477
ALV42243.1	ALV42242.1	AU252_14725	AU252_14720	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.950
ALV42243.1	ALV42244.1	AU252_14725	AU252_14730	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.968
ALV42243.1	ALV42245.1	AU252_14725	AU252_14735	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Poxvirus protein I5; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.773
ALV42243.1	ALV43984.1	AU252_14725	AU252_14745	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.903
ALV42244.1	ALV42242.1	AU252_14730	AU252_14720	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.945
ALV42244.1	ALV42243.1	AU252_14730	AU252_14725	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.968
ALV42244.1	ALV42245.1	AU252_14730	AU252_14735	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Poxvirus protein I5; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.748
ALV42244.1	ALV43984.1	AU252_14730	AU252_14745	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.884
ALV42245.1	ALV42242.1	AU252_14735	AU252_14720	Poxvirus protein I5; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.666
ALV42245.1	ALV42243.1	AU252_14735	AU252_14725	Poxvirus protein I5; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.773
ALV42245.1	ALV42244.1	AU252_14735	AU252_14730	Poxvirus protein I5; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.748
ALV42245.1	ALV43984.1	AU252_14735	AU252_14745	Poxvirus protein I5; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.410
ALV43984.1	ALV42242.1	AU252_14745	AU252_14720	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.477
ALV43984.1	ALV42243.1	AU252_14745	AU252_14725	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.903
ALV43984.1	ALV42244.1	AU252_14745	AU252_14730	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.884
ALV43984.1	ALV42245.1	AU252_14745	AU252_14735	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Poxvirus protein I5; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.410

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