(12 nodes) Exonucleolytic trimming to generate mature 3-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA), and 3 exoribonuclease family, domain 1 network (Colletotrichum fructicola)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CGGC5_1991	Exosome complex exonuclease exoribonuclease; Belongs to the RNR ribonuclease family. (953 aa)
	CGGC5_1878	3 exoribonuclease. (298 aa)
	CGGC5_12793	ATP-dependent RNA helicase dob1. (1083 aa)
	CGGC5_12980	3 exoribonuclease family protein. (268 aa)
	CGGC5_12551	Exosome-associated family protein. (179 aa)
	CGGC5_206	Elongation factor tu gtp binding domain protein. (799 aa)
	CGGC5_11764	3 exoribonuclease family protein. (315 aa)
	CGGC5_10897	3 exoribonuclease family protein. (570 aa)
	CGGC5_5332	3 exoribonuclease family protein. (311 aa)
	CGGC5_3818	Exosomal core protein csl4. (238 aa)
	CGGC5_3936	Exosome complex exonuclease rrp40. (242 aa)
	CGGC5_3377	Exosome complex exonuclease rrp4. (343 aa)

Your Current Organism:

Colletotrichum fructicola

NCBI taxonomy Id: 1213859
Other names: C. fructicola Nara gc5, Colletotrichum fructicola Nara gc5

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CGGC5_10897	CGGC5_11764	L2FQ41	L2FMM2	3 exoribonuclease family protein.	3 exoribonuclease family protein.	0.988
CGGC5_10897	CGGC5_12551	L2FQ41	L2FJY5	3 exoribonuclease family protein.	Exosome-associated family protein.	0.969
CGGC5_10897	CGGC5_12793	L2FQ41	L2FIB0	3 exoribonuclease family protein.	ATP-dependent RNA helicase dob1.	0.975
CGGC5_10897	CGGC5_1878	L2FQ41	L2FHL9	3 exoribonuclease family protein.	3 exoribonuclease.	0.988
CGGC5_10897	CGGC5_1991	L2FQ41	L2FF35	3 exoribonuclease family protein.	Exosome complex exonuclease exoribonuclease; Belongs to the RNR ribonuclease family.	0.934
CGGC5_10897	CGGC5_206	L2FQ41	L2FLY8	3 exoribonuclease family protein.	Elongation factor tu gtp binding domain protein.	0.955
CGGC5_10897	CGGC5_3377	L2FQ41	L2GEY3	3 exoribonuclease family protein.	Exosome complex exonuclease rrp4.	0.991
CGGC5_10897	CGGC5_3818	L2FQ41	L2GE60	3 exoribonuclease family protein.	Exosomal core protein csl4.	0.989
CGGC5_10897	CGGC5_3936	L2FQ41	L2GEU0	3 exoribonuclease family protein.	Exosome complex exonuclease rrp40.	0.991
CGGC5_10897	CGGC5_5332	L2FQ41	L2G865	3 exoribonuclease family protein.	3 exoribonuclease family protein.	0.992
CGGC5_11764	CGGC5_10897	L2FMM2	L2FQ41	3 exoribonuclease family protein.	3 exoribonuclease family protein.	0.988
CGGC5_11764	CGGC5_12551	L2FMM2	L2FJY5	3 exoribonuclease family protein.	Exosome-associated family protein.	0.999
CGGC5_11764	CGGC5_12793	L2FMM2	L2FIB0	3 exoribonuclease family protein.	ATP-dependent RNA helicase dob1.	0.997
CGGC5_11764	CGGC5_12980	L2FMM2	L2FJU1	3 exoribonuclease family protein.	3 exoribonuclease family protein.	0.998
CGGC5_11764	CGGC5_1878	L2FMM2	L2FHL9	3 exoribonuclease family protein.	3 exoribonuclease.	0.999
CGGC5_11764	CGGC5_1991	L2FMM2	L2FF35	3 exoribonuclease family protein.	Exosome complex exonuclease exoribonuclease; Belongs to the RNR ribonuclease family.	0.982
CGGC5_11764	CGGC5_206	L2FMM2	L2FLY8	3 exoribonuclease family protein.	Elongation factor tu gtp binding domain protein.	0.999
CGGC5_11764	CGGC5_3377	L2FMM2	L2GEY3	3 exoribonuclease family protein.	Exosome complex exonuclease rrp4.	0.999
CGGC5_11764	CGGC5_3818	L2FMM2	L2GE60	3 exoribonuclease family protein.	Exosomal core protein csl4.	0.999
CGGC5_11764	CGGC5_3936	L2FMM2	L2GEU0	3 exoribonuclease family protein.	Exosome complex exonuclease rrp40.	0.999