(10 nodes) Nonfunctional rRNA decay network (Colletotrichum fructicola)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CGGC5_8743	Endoplasmic reticulum and nuclear membrane proteinc. (654 aa)
	CGGC5_8202	26s protease regulatory subunit 8; Belongs to the AAA ATPase family. (389 aa)
	CGGC5_5332	3 exoribonuclease family protein. (311 aa)
	CGGC5_3311	Ubiquitin fusion degradation protein. (356 aa)
	CGGC5_14660	Protein DOM34 homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (426 aa)
	CGGC5_2061	Thermotolerance protein. (1350 aa)
	CGGC5_13741	Exosome complex exonuclease. (908 aa)
	CGGC5_1878	3 exoribonuclease. (298 aa)
	CGGC5_11942	Uncharacterized protein. (246 aa)
	CGGC5_11764	3 exoribonuclease family protein. (315 aa)

Your Current Organism:

Colletotrichum fructicola

NCBI taxonomy Id: 1213859
Other names: C. fructicola Nara gc5, Colletotrichum fructicola Nara gc5

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CGGC5_11764	CGGC5_13741	L2FMM2	L2FG36	3 exoribonuclease family protein.	Exosome complex exonuclease.	0.976
CGGC5_11764	CGGC5_1878	L2FMM2	L2FHL9	3 exoribonuclease family protein.	3 exoribonuclease.	0.999
CGGC5_11764	CGGC5_5332	L2FMM2	L2G865	3 exoribonuclease family protein.	3 exoribonuclease family protein.	0.999
CGGC5_13741	CGGC5_11764	L2FG36	L2FMM2	Exosome complex exonuclease.	3 exoribonuclease family protein.	0.976
CGGC5_13741	CGGC5_1878	L2FG36	L2FHL9	Exosome complex exonuclease.	3 exoribonuclease.	0.432
CGGC5_13741	CGGC5_5332	L2FG36	L2G865	Exosome complex exonuclease.	3 exoribonuclease family protein.	0.432
CGGC5_13741	CGGC5_8202	L2FG36	L2FZ69	Exosome complex exonuclease.	26s protease regulatory subunit 8; Belongs to the AAA ATPase family.	0.798
CGGC5_1878	CGGC5_11764	L2FHL9	L2FMM2	3 exoribonuclease.	3 exoribonuclease family protein.	0.999
CGGC5_1878	CGGC5_13741	L2FHL9	L2FG36	3 exoribonuclease.	Exosome complex exonuclease.	0.432
CGGC5_1878	CGGC5_5332	L2FHL9	L2G865	3 exoribonuclease.	3 exoribonuclease family protein.	0.999
CGGC5_3311	CGGC5_8202	L2GFA2	L2FZ69	Ubiquitin fusion degradation protein.	26s protease regulatory subunit 8; Belongs to the AAA ATPase family.	0.826
CGGC5_3311	CGGC5_8743	L2GFA2	L2FYA5	Ubiquitin fusion degradation protein.	Endoplasmic reticulum and nuclear membrane proteinc.	0.999
CGGC5_5332	CGGC5_11764	L2G865	L2FMM2	3 exoribonuclease family protein.	3 exoribonuclease family protein.	0.999
CGGC5_5332	CGGC5_13741	L2G865	L2FG36	3 exoribonuclease family protein.	Exosome complex exonuclease.	0.432
CGGC5_5332	CGGC5_1878	L2G865	L2FHL9	3 exoribonuclease family protein.	3 exoribonuclease.	0.999
CGGC5_8202	CGGC5_13741	L2FZ69	L2FG36	26s protease regulatory subunit 8; Belongs to the AAA ATPase family.	Exosome complex exonuclease.	0.798
CGGC5_8202	CGGC5_3311	L2FZ69	L2GFA2	26s protease regulatory subunit 8; Belongs to the AAA ATPase family.	Ubiquitin fusion degradation protein.	0.826
CGGC5_8202	CGGC5_8743	L2FZ69	L2FYA5	26s protease regulatory subunit 8; Belongs to the AAA ATPase family.	Endoplasmic reticulum and nuclear membrane proteinc.	0.665
CGGC5_8743	CGGC5_3311	L2FYA5	L2GFA2	Endoplasmic reticulum and nuclear membrane proteinc.	Ubiquitin fusion degradation protein.	0.999
CGGC5_8743	CGGC5_8202	L2FYA5	L2FZ69	Endoplasmic reticulum and nuclear membrane proteinc.	26s protease regulatory subunit 8; Belongs to the AAA ATPase family.	0.665