(28 nodes) Nuclear body network (Colletotrichum fructicola)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CGGC5_14648	Nonselective cation channel. (660 aa)
	CGGC5_2378	Arsenite resistance protein ars2. (883 aa)
	CGGC5_14314	Cation channel family. (1166 aa)
	CGGC5_2126	Ion transporter. (690 aa)
	CGGC5_2021	Duf455 domain-containing protein. (1201 aa)
	CGGC5_1741	Pre-mRNA splicing factor. (194 aa)
	CGGC5_11933	Phosphoinositide phospholipase C. (1064 aa)
	CGGC5_11874	Zinc finger protein 830-like protein. (359 aa)
	CGGC5_12323	Ccch zinc finger and rrm domain-containing protein. (706 aa)
	CGGC5_11785	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (632 aa)
	CGGC5_11666	Yt521-b-like splicing. (617 aa)
	CGGC5_1351	Helicase sen1. (2051 aa)
	CGGC5_9934	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (559 aa)
	CGGC5_9597	Nacht and wd domain protein. (1574 aa)
	CGGC5_1074	Ring finger domain protein. (882 aa)
	CGGC5_7965	Phosphoinositide phospholipase C. (561 aa)
	CGGC5_7536	Ccch zinc finger protein. (432 aa)
	CGGC5_7138	Magnesium and cobalt transport protein. (228 aa)
	CGGC5_7266	WD domain-containing protein. (339 aa)
	CGGC5_6402	Beta-lactamase. (508 aa)
	CGGC5_5948	Pre-rRNA processing protein. (866 aa)
	CGGC5_5637	Phosphoinositide phospholipase C. (722 aa)
	CGGC5_5557	Nonselective cation channel. (829 aa)
	CGGC5_5186	Ubiquitin-protein ligase. (1782 aa)
	CGGC5_4997	Phosphoinositide phospholipase C. (763 aa)
	CGGC5_4840	Rnp domain protein. (218 aa)
	CGGC5_3899	C3H1-type domain-containing protein. (1138 aa)
	CGGC5_3100	Rnp domain-containing protein. (327 aa)

Your Current Organism:

Colletotrichum fructicola

NCBI taxonomy Id: 1213859
Other names: C. fructicola Nara gc5, Colletotrichum fructicola Nara gc5

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CGGC5_1074	CGGC5_5186	L2FVZ6	L2G9S0	Ring finger domain protein.	Ubiquitin-protein ligase.	0.542
CGGC5_11666	CGGC5_11785	L2FN48	L2FM02	Yt521-b-like splicing.	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	0.997
CGGC5_11666	CGGC5_12323	L2FN48	L2FLV1	Yt521-b-like splicing.	Ccch zinc finger and rrm domain-containing protein.	0.613
CGGC5_11666	CGGC5_1741	L2FN48	L2FKX8	Yt521-b-like splicing.	Pre-mRNA splicing factor.	0.869
CGGC5_11666	CGGC5_2021	L2FN48	L2FEZ8	Yt521-b-like splicing.	Duf455 domain-containing protein.	0.997
CGGC5_11666	CGGC5_2378	L2FN48	L2FC94	Yt521-b-like splicing.	Arsenite resistance protein ars2.	0.487
CGGC5_11666	CGGC5_3100	L2FN48	L2GG32	Yt521-b-like splicing.	Rnp domain-containing protein.	0.461
CGGC5_11666	CGGC5_3899	L2FN48	L2GE17	Yt521-b-like splicing.	C3H1-type domain-containing protein.	0.890
CGGC5_11666	CGGC5_4840	L2FN48	L2GB01	Yt521-b-like splicing.	Rnp domain protein.	0.830
CGGC5_11666	CGGC5_5186	L2FN48	L2G9S0	Yt521-b-like splicing.	Ubiquitin-protein ligase.	0.570
CGGC5_11666	CGGC5_6402	L2FN48	L2G5Y3	Yt521-b-like splicing.	Beta-lactamase.	0.869
CGGC5_11666	CGGC5_7536	L2FN48	L2G1B7	Yt521-b-like splicing.	Ccch zinc finger protein.	0.586
CGGC5_11785	CGGC5_11666	L2FM02	L2FN48	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	Yt521-b-like splicing.	0.997
CGGC5_11785	CGGC5_1741	L2FM02	L2FKX8	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	Pre-mRNA splicing factor.	0.807
CGGC5_11785	CGGC5_3899	L2FM02	L2GE17	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	C3H1-type domain-containing protein.	0.891
CGGC5_11785	CGGC5_4840	L2FM02	L2GB01	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	Rnp domain protein.	0.951
CGGC5_11785	CGGC5_6402	L2FM02	L2G5Y3	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	Beta-lactamase.	0.807
CGGC5_11785	CGGC5_9934	L2FM02	L2FU15	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	0.771
CGGC5_11933	CGGC5_4997	L2FLC7	L2GAB8	Phosphoinositide phospholipase C.	Phosphoinositide phospholipase C.	0.940
CGGC5_11933	CGGC5_5637	L2FLC7	L2G860	Phosphoinositide phospholipase C.	Phosphoinositide phospholipase C.	0.677