(32 nodes) Cytosolic small ribosomal subunit network (Colletotrichum fructicola)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CGGC5_14235	Uncharacterized protein. (470 aa)
	CGGC5_13898	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (135 aa)
	CGGC5_13012	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (180 aa)
	CGGC5_12176	Uncharacterized protein. (138 aa)
	RPS1	40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family. (256 aa)
	CGGC5_10580	40s ribosomal protein s2; Belongs to the universal ribosomal protein uS5 family. (233 aa)
	CGGC5_9257	40s ribosomal protein s27. (82 aa)
	CGGC5_9331	40S ribosomal protein S21; Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Has a physiological role leading to 18S rRNA stability. (87 aa)
	CGGC5_8166	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (183 aa)
	CGGC5_8176	Uncharacterized protein. (312 aa)
	CGGC5_7980	Uncharacterized protein. (511 aa)
	CGGC5_7981	40s ribosomal protein s19. (151 aa)
	CGGC5_8162	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (208 aa)
	CGGC5_8182	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (104 aa)
	CGGC5_7272	Uncharacterized protein. (342 aa)
	CGGC5_134	Ribosomal protein s28e. (68 aa)
	CGGC5_6265	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (118 aa)
	CGGC5_5952	40s ribosomal protein s16; Belongs to the universal ribosomal protein uS9 family. (143 aa)
	CGGC5_5836	Cia30 family protein. (163 aa)
	CGGC5_6264	Ubiquitin. (167 aa)
	CGGC5_5835	BZIP domain-containing protein. (276 aa)
	CGGC5_5433	40s ribosomal protein s11; Belongs to the universal ribosomal protein uS17 family. (161 aa)
	CGGC5_5434	Autophagy protein. (304 aa)
	CGGC5_5237	40s ribosomal protein s14; Belongs to the universal ribosomal protein uS11 family. (150 aa)
	CGGC5_4887	40s ribosomal protein s15; Belongs to the universal ribosomal protein uS19 family. (153 aa)
	CGGC5_4469	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (148 aa)
	CGGC5_4470	40s ribosomal protein s22; Belongs to the universal ribosomal protein uS8 family. (130 aa)
	CGGC5_3970	Eukaryotic translation initiation factor 2A; Functions in the early steps of protein synthesis of a small number of specific mRNAs. Acts by directing the binding of methionyl- tRNAi to 40S ribosomal subunits. In contrast to the eIF-2 complex, it binds methionyl-tRNAi to 40S subunits in a codon-dependent manner, whereas the eIF-2 complex binds methionyl-tRNAi to 40S subunits in a GTP-dependent manner. (605 aa)
	CGGC5_417	40s ribosomal protein s17. (148 aa)
	CGGC5_3193	40s ribosomal protein; Belongs to the universal ribosomal protein uS4 family. (191 aa)
	CGGC5_3293	40s ribosomal protein s10-a. (129 aa)
	CGGC5_2627	40s ribosomal protein s0. (267 aa)

Your Current Organism:

Colletotrichum fructicola

NCBI taxonomy Id: 1213859
Other names: C. fructicola Nara gc5, Colletotrichum fructicola Nara gc5

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CGGC5_10580	CGGC5_12176	L2FR85	L2FKN0	40s ribosomal protein s2; Belongs to the universal ribosomal protein uS5 family.	Uncharacterized protein.	0.996
CGGC5_10580	CGGC5_13012	L2FR85	L2FHX1	40s ribosomal protein s2; Belongs to the universal ribosomal protein uS5 family.	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	0.999
CGGC5_10580	CGGC5_134	L2FR85	L2G471	40s ribosomal protein s2; Belongs to the universal ribosomal protein uS5 family.	Ribosomal protein s28e.	0.999
CGGC5_10580	CGGC5_13898	L2FR85	L2FFH5	40s ribosomal protein s2; Belongs to the universal ribosomal protein uS5 family.	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	0.999
CGGC5_10580	CGGC5_14235	L2FR85	L2FD01	40s ribosomal protein s2; Belongs to the universal ribosomal protein uS5 family.	Uncharacterized protein.	0.993
CGGC5_10580	CGGC5_2627	L2FR85	L2GIK6	40s ribosomal protein s2; Belongs to the universal ribosomal protein uS5 family.	40s ribosomal protein s0.	0.999
CGGC5_10580	CGGC5_3193	L2FR85	L2GFQ7	40s ribosomal protein s2; Belongs to the universal ribosomal protein uS5 family.	40s ribosomal protein; Belongs to the universal ribosomal protein uS4 family.	0.999
CGGC5_10580	CGGC5_3293	L2FR85	L2GGD1	40s ribosomal protein s2; Belongs to the universal ribosomal protein uS5 family.	40s ribosomal protein s10-a.	0.999
CGGC5_10580	CGGC5_417	L2FR85	L2GEG1	40s ribosomal protein s2; Belongs to the universal ribosomal protein uS5 family.	40s ribosomal protein s17.	0.999
CGGC5_10580	CGGC5_4469	L2FR85	L2GBB5	40s ribosomal protein s2; Belongs to the universal ribosomal protein uS5 family.	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.	0.998
CGGC5_10580	CGGC5_4470	L2FR85	L2GC27	40s ribosomal protein s2; Belongs to the universal ribosomal protein uS5 family.	40s ribosomal protein s22; Belongs to the universal ribosomal protein uS8 family.	0.999
CGGC5_10580	CGGC5_4887	L2FR85	L2GBA7	40s ribosomal protein s2; Belongs to the universal ribosomal protein uS5 family.	40s ribosomal protein s15; Belongs to the universal ribosomal protein uS19 family.	0.999
CGGC5_10580	CGGC5_5237	L2FR85	L2G9M3	40s ribosomal protein s2; Belongs to the universal ribosomal protein uS5 family.	40s ribosomal protein s14; Belongs to the universal ribosomal protein uS11 family.	0.999
CGGC5_10580	CGGC5_5433	L2FR85	L2G8M1	40s ribosomal protein s2; Belongs to the universal ribosomal protein uS5 family.	40s ribosomal protein s11; Belongs to the universal ribosomal protein uS17 family.	0.998
CGGC5_10580	CGGC5_5434	L2FR85	L2G8X4	40s ribosomal protein s2; Belongs to the universal ribosomal protein uS5 family.	Autophagy protein.	0.997
CGGC5_10580	CGGC5_5835	L2FR85	L2G7H0	40s ribosomal protein s2; Belongs to the universal ribosomal protein uS5 family.	BZIP domain-containing protein.	0.992
CGGC5_10580	CGGC5_5836	L2FR85	L2G6J3	40s ribosomal protein s2; Belongs to the universal ribosomal protein uS5 family.	Cia30 family protein.	0.992
CGGC5_10580	CGGC5_5952	L2FR85	L2G619	40s ribosomal protein s2; Belongs to the universal ribosomal protein uS5 family.	40s ribosomal protein s16; Belongs to the universal ribosomal protein uS9 family.	0.999
CGGC5_10580	CGGC5_6264	L2FR85	L2G765	40s ribosomal protein s2; Belongs to the universal ribosomal protein uS5 family.	Ubiquitin.	0.996
CGGC5_10580	CGGC5_6265	L2FR85	L2G5C6	40s ribosomal protein s2; Belongs to the universal ribosomal protein uS5 family.	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.999