STRINGSTRING
CGGC5_13049 CGGC5_13049 CGGC5_11912 CGGC5_11912 CGGC5_13823 CGGC5_13823 CGGC5_9255 CGGC5_9255 CGGC5_7271 CGGC5_7271 CGGC5_6769 CGGC5_6769 CGGC5_14034 CGGC5_14034 CGGC5_4858 CGGC5_4858
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CGGC5_13049Cell differentiation protein rcd1. (309 aa)
CGGC5_11912ABC transporter. (279 aa)
CGGC5_13823Ccr4-not transcription complex subunit. (2186 aa)
CGGC5_9255Leucine rich repeat domain protein. (530 aa)
CGGC5_7271General negative regulator of transcription subunit 4. (738 aa)
CGGC5_6769Ccr4-not core complex subunit. (495 aa)
CGGC5_14034Glucose-repressible alcohol dehydrogenase transcriptional effector. (765 aa)
CGGC5_4858Ccr4-not transcription subunit 3. (625 aa)
Your Current Organism:
Colletotrichum fructicola
NCBI taxonomy Id: 1213859
Other names: C. fructicola Nara gc5, Colletotrichum fructicola Nara gc5
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