STRINGSTRING
CGGC5_4581 CGGC5_4581 CGGC5_2602 CGGC5_2602 CGGC5_3537 CGGC5_3537 CGGC5_12450 CGGC5_12450 CGGC5_11928 CGGC5_11928 CGGC5_11555 CGGC5_11555 CGGC5_10657 CGGC5_10657 CGGC5_9598 CGGC5_9598 SLX4 SLX4 CGGC5_772 CGGC5_772
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CGGC5_4581Forkhead domain-containing protein. (1091 aa)
CGGC5_2602Uncharacterized protein. (678 aa)
CGGC5_3537Threonine synthase. (1142 aa)
CGGC5_12450AT hook domain-containing protein. (1405 aa)
CGGC5_11928DNA repair protein rad16. (1081 aa)
CGGC5_11555Uncharacterized protein. (170 aa)
CGGC5_10657Chromobox protein/heterochromatin protein 1 beta-like protein. (384 aa)
CGGC5_9598Chromo domain-containing protein. (620 aa)
SLX4Structure-specific endonuclease subunit SLX4; Regulatory subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. (904 aa)
CGGC5_772Cupin domain protein. (641 aa)
Your Current Organism:
Colletotrichum fructicola
NCBI taxonomy Id: 1213859
Other names: C. fructicola Nara gc5, Colletotrichum fructicola Nara gc5
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