(11 nodes) K Homology domain, type 1 superfamily network (Colletotrichum fructicola)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CGGC5_5492	Kh domain rna binding protein. (471 aa)
	CGGC5_2434	Pre-rRNA-processing protein pno1. (259 aa)
	CGGC5_2301	Zinc knuckle transcription factor splicing factor msl5. (375 aa)
	CGGC5_2075	Kh domain-containing protein. (934 aa)
	CGGC5_2085	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (323 aa)
	CGGC5_7403	Kh domain-containing protein. (543 aa)
	CGGC5_6793	Kh domain rna-binding protein. (377 aa)
	CGGC5_3936	Exosome complex exonuclease rrp40. (242 aa)
	CGGC5_3377	Exosome complex exonuclease rrp4. (343 aa)
	CGGC5_3248	RNA binding effector protein. (1265 aa)
	CGGC5_2953	Kh domain-containing protein. (477 aa)

Your Current Organism:

Colletotrichum fructicola

NCBI taxonomy Id: 1213859
Other names: C. fructicola Nara gc5, Colletotrichum fructicola Nara gc5

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CGGC5_2075	CGGC5_5492	L2FER3	L2G7Q2	Kh domain-containing protein.	Kh domain rna binding protein.	0.411
CGGC5_2075	CGGC5_6793	L2FER3	L2G4Z8	Kh domain-containing protein.	Kh domain rna-binding protein.	0.411
CGGC5_2085	CGGC5_2434	L2FES0	L2FBV6	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	Pre-rRNA-processing protein pno1.	0.976
CGGC5_2085	CGGC5_3377	L2FES0	L2GEY3	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	Exosome complex exonuclease rrp4.	0.978
CGGC5_2085	CGGC5_3936	L2FES0	L2GEU0	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	Exosome complex exonuclease rrp40.	0.978
CGGC5_2301	CGGC5_2953	L2FCA0	L2GGF4	Zinc knuckle transcription factor splicing factor msl5.	Kh domain-containing protein.	0.531
CGGC5_2301	CGGC5_7403	L2FCA0	L2G3C0	Zinc knuckle transcription factor splicing factor msl5.	Kh domain-containing protein.	0.579
CGGC5_2434	CGGC5_2085	L2FBV6	L2FES0	Pre-rRNA-processing protein pno1.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.976
CGGC5_2434	CGGC5_3377	L2FBV6	L2GEY3	Pre-rRNA-processing protein pno1.	Exosome complex exonuclease rrp4.	0.703
CGGC5_2434	CGGC5_3936	L2FBV6	L2GEU0	Pre-rRNA-processing protein pno1.	Exosome complex exonuclease rrp40.	0.696
CGGC5_2953	CGGC5_2301	L2GGF4	L2FCA0	Kh domain-containing protein.	Zinc knuckle transcription factor splicing factor msl5.	0.531
CGGC5_2953	CGGC5_7403	L2GGF4	L2G3C0	Kh domain-containing protein.	Kh domain-containing protein.	0.424
CGGC5_3248	CGGC5_5492	L2GFP1	L2G7Q2	RNA binding effector protein.	Kh domain rna binding protein.	0.441
CGGC5_3248	CGGC5_6793	L2GFP1	L2G4Z8	RNA binding effector protein.	Kh domain rna-binding protein.	0.441
CGGC5_3377	CGGC5_2085	L2GEY3	L2FES0	Exosome complex exonuclease rrp4.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.978
CGGC5_3377	CGGC5_2434	L2GEY3	L2FBV6	Exosome complex exonuclease rrp4.	Pre-rRNA-processing protein pno1.	0.703
CGGC5_3377	CGGC5_3936	L2GEY3	L2GEU0	Exosome complex exonuclease rrp4.	Exosome complex exonuclease rrp40.	0.999
CGGC5_3377	CGGC5_7403	L2GEY3	L2G3C0	Exosome complex exonuclease rrp4.	Kh domain-containing protein.	0.701
CGGC5_3936	CGGC5_2085	L2GEU0	L2FES0	Exosome complex exonuclease rrp40.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.978
CGGC5_3936	CGGC5_2434	L2GEU0	L2FBV6	Exosome complex exonuclease rrp40.	Pre-rRNA-processing protein pno1.	0.696