STRINGSTRING
BN159_1120 BN159_1120 BN159_1121 BN159_1121 BN159_1122 BN159_1122 BN159_1123 BN159_1123 BN159_1124 BN159_1124 BN159_1125 BN159_1125 rbsA1 rbsA1 BN159_1127 BN159_1127 BN159_1128 BN159_1128 rhaB rhaB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BN159_1120LacI family transcriptional regulator. (341 aa)
BN159_1121Hypothetical protein. (472 aa)
BN159_1122Hypothetical protein. (106 aa)
BN159_1123Solute-binding lipoprotein. (361 aa)
BN159_1124ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. (327 aa)
BN159_1125ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. (346 aa)
rbsA1Ribose import ATP-binding protein RbsA 1; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (505 aa)
BN159_1127Putative sugar isomerase. (386 aa)
BN159_1128Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. (679 aa)
rhaBRhamnulokinase. (491 aa)
Your Current Organism:
Streptomyces davaonensis
NCBI taxonomy Id: 1214101
Other names: S. davaonensis JCM 4913, Streptomyces davaonensis 768, Streptomyces davaonensis JCM 4913, Streptomyces davawensis 768, Streptomyces davawensis JCM 4913
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